RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SERPINA6P08185 405 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 NAGAP17050 411 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CES1P23141 567 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 IL4RP24394 825 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 RPL10P27635 214 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 GNL1P36915 607 aaPredicted RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 ETFBP38117 255 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 GTF2A2P52657 109 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CAP1Q01518 475 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CYP24A1Q07973 514 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 RALGDSQ12967 914 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CCDC14Q49A88 953 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 CES4AQ5XG92 561 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 DSG4Q86SJ6 1040 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CARM1Q86X55 608 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TMEM126BQ8IUX1 230 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 GPD1LQ8N335 351 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 FBXW8Q8N3Y1 598 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ZCCHC9Q8N567 271 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 DHRS9Q9BPW9 319 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 SCUBE2Q9NQ36 999 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 RNF186Q9NXI6 227 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ST14Q9Y5Y6 855 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 LRRC37A2A6NM11 1700 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 PDHXO00330 501 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 FKBP9O95302 570 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 OSBPP22059 807 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 DCKP27707 260 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 POLR2BP30876 1174 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 MLLT10P55197 1068 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 DGKDQ16760 1214 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 PPP6R3Q5H9R7 873 aaPredicted RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 KRT39Q6A163 491 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 METTL7BQ6UX53 244 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 DENND5BQ6ZUT9 1274 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 SV2AQ7L0J3 742 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TAS2R42Q7RTR8 314 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ARID3BQ8IVW6 561 aaPredicted RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 FIBCD1Q8N539 461 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TRAPPC12Q8WVT3 735 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ATL1Q8WXF7 558 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TTC17Q96AE7 1141 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ACDQ96AP0 544 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 TRIM56Q9BRZ2 755 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TARS2Q9BW92 718 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 CALN1Q9BXU9 219 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 TRIT1Q9H3H1 467 aaKnown RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 COPS7BQ9H9Q2 264 aaPredicted RBP12.1□□□□□ -0.47
RTN3-203ENST00000341307 C12orf10Q9HB07 376 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 KLQ9UEF7 1012 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 HAT1O14929 419 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 PIAS1O75925 651 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 SGPL1O95470 568 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 SLC25A27O95847 323 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 GJB1P08034 283 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 EPHA3P29320 983 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ARL2P36404 184 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 TM4SF4P48230 202 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 KRT6CP48668 564 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 AQP5P55064 265 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 SNRPFP62306 86 aaKnown RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 STX3Q13277 289 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 CRHR2Q13324 411 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 FAM182AQ5T1J6 154 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 FRA10AC1Q70Z53 315 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 SLC47A2Q86VL8 602 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 HM13Q8TCT9 377 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 SEPT1Q8WYJ6 367 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 EBF4Q9BQW3 602 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 NIFKQ9BYG3 293 aaKnown RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ZNF395Q9H8N7 513 aaPredicted RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 VPS37BQ9H9H4 285 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 PPME1Q9Y570 386 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms