RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 UNC93AQ86WB7 457 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 DSELQ8IZU8 1212 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 FAR2Q96K12 515 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 APOL2Q9BQE5 337 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 B3GNT5Q9BYG0 378 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 WDR55Q9H6Y2 383 aaPredicted RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 EIF2B3Q9NR50 452 aaKnown RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 ARHGEF4Q9NR80 690 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 CHCHD3Q9NX63 227 aaKnown RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 MOCS1Q9NZB8 636 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 NCKIPSDQ9NZQ3 722 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 RCOR3Q9P2K3 495 aaPredicted RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 SLC17A6Q9P2U8 582 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 ERI2A8K979 691 aaKnown RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 NCAM2O15394 837 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 ENDOD1O94919 500 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 NPY2RP49146 381 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 LIMK2P53671 638 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 PRAMEP78395 509 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 AMHR2Q16671 573 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 DCAF4L1Q3SXM0 396 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 GLRA4Q5JXX5 417 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 SLC26A9Q7LBE3 791 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 LINC00523Q86TU6 105 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 PSTKQ8IV42 348 aaKnown RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 DEFB106AQ8N104 65 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 APPL2Q8NEU8 664 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 RIN3Q8TB24 985 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 RDH11Q8TC12 318 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 AFG1LQ8WV93 481 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 FAM49AQ9H0Q0 323 aaPredicted RBP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 PLEKHA5Q9HAU0 1116 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 ADAMTS6Q9UKP5 1117 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 SNX13Q9Y5W8 968 aa9.62□□□□□ -0.87
TRERF1-201ENST00000340840 SF3B1O75533 1304 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRERF1-201ENST00000340840 ZNF487B1APH4 448 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 PAPSS1O43252 624 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 LGR5O75473 907 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 CABYRO75952 493 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SRP72O76094 671 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 ALDOAP04075 364 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 EDN1P05305 212 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 L1CAMP32004 1257 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 MTTPP55157 894 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 TPD52P55327 224 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 LSAMPQ13449 338 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 HNRNPDQ14103 355 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 KIF19Q2TAC6 998 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 LIPMQ5VYY2 423 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 STRADAQ7RTN6 431 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 C12orf42Q96LP6 360 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 RBBP8Q99708 897 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 GATA5Q9BWX5 397 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SPATC1LQ9H0A9 340 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 IPO11Q9UI26 975 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 AKAP10O43572 662 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 GMNNO75496 209 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SLC25A27O95847 323 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 CD4P01730 458 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 CYP2C9P11712 490 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 INSRRP14616 1297 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 ADSLP30566 484 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 GRIA4P48058 902 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 HARS2P49590 506 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 ADGRE1Q14246 886 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 DGKDQ16760 1214 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SH2D5Q6ZV89 423 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 PGAM4Q8N0Y7 254 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 PCYOX1LQ8NBM8 494 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SLC7A14Q8TBB6 771 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 HDAC11Q96DB2 347 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 HSFY1Q96LI6 401 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SLC4A5Q9BY07 1137 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 GNEQ9Y223 722 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 HEATR9A2RTY3 570 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 MAP3K13O43283 966 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 VTNP04004 478 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 STMN1P16949 149 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 IL10P22301 178 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 MPSTP25325 297 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SLC12A1Q13621 1099 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 CELF3Q5SZQ8 465 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 LPCAT2Q7L5N7 544 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 RAB44Q7Z6P3 723 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 DRAXINQ8NBI3 349 aaPredicted RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 PPHLN1Q8NEY8 458 aaKnown RBP9.61□□□□□ -0.87
TRERF1-201ENST00000340840 SGF29Q96ES7 293 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 ELMO2Q96JJ3 720 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 AFG3L2Q9Y4W6 797 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 ADAMTSL1Q8N6G6 1762 aa9.61□□□□□ -0.87
TRERF1-201ENST00000340840 TRIM38O00635 465 aa9.6□□□□□ -0.87
TRERF1-201ENST00000340840 GIPC1O14908 333 aa9.6□□□□□ -0.87
TRERF1-201ENST00000340840 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
TRERF1-201ENST00000340840 AVPR1AP37288 418 aa9.6□□□□□ -0.87
TRERF1-201ENST00000340840 MBTD1Q05BQ5 628 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms