RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 H0YGN5 161 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 C7P10643 843 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CA4P22748 312 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 RBL1P28749 1068 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 STX2P32856 288 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 DNAJC3Q13217 504 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 HIF1AQ16665 826 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 RAB6CQ53S08 254 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 DENND2CQ68D51 928 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CHSY1Q86X52 802 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 TDHQ8IZJ6 230 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 GABPB2Q8TAK5 448 aaPredicted RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 FBXO25Q8TCJ0 367 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 ARHGEF2Q92974 986 aaKnown RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 ACDQ96AP0 544 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 TMEM121Q9BTD3 319 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 RAB6CQ9H0N0 254 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 PRDM12Q9H4Q4 367 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CCSER2Q9H7U1 834 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 ZNF180Q9UJW8 692 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 NFS1Q9Y697 457 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 E7EVH7 732 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 FAM72CH0Y354 149 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 RNF103O00237 685 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 RIPK2O43353 540 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 CREB3O43889 395 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 RAMP2O60895 175 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 PAPSS2O95340 614 aaPredicted RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 MBL2P11226 248 aaPredicted RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 VAV1P15498 845 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 HSD17B3P37058 310 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 IFRD2Q12894 506 aaPredicted RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 ZNF77Q15935 545 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 FAM72AQ5TYM5 149 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 FAM72DQ6L9T8 149 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 C1orf228Q6PIY5 440 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 FAM72BQ86X60 149 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 DCAF4L2Q8NA75 395 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 ZNF707Q96C28 371 aaPredicted RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 MSANTD3Q96H12 275 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 SGSM3Q96HU1 749 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 C17orf80Q9BSJ5 609 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 PRKAG3Q9UGI9 489 aa7.34□□□□□ -1.23
NUP43-201ENST00000340413 AGO1Q9UL18 857 aaKnown RBP7.34□□□□□ -1.23
NUP43-201ENST00000340413 MUC22E2RYF6 1773 aaPredicted RBP7.34□□□□□ -1.24
NUP43-201ENST00000340413 COL4A2P08572 1712 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 LCHNA4D1U4 455 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 RASA4BC9J798 803 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 RASA4O43374 803 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 MOSPD3O75425 235 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 ALDH1A2O94788 518 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 PEX11BO96011 259 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 RPL17P18621 184 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 CORO1AP31146 461 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 EIF2DP41214 584 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 KCNJ1P48048 391 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 SNX1Q13596 522 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 GPR149Q86SP6 731 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 CMTM8Q8IZV2 173 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 PYROXD2Q8N2H3 581 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 CELF5Q8N6W0 485 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 FIBINQ8TAL6 211 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 SHKBP1Q8TBC3 707 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 IFT81Q8WYA0 676 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 LMLNQ96KR4 655 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NECTIN4Q96NY8 510 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 RUFY1Q96T51 708 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NACA2Q9H009 215 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 GLOD4Q9HC38 313 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.33□□□□□ -1.24
NUP43-201ENST00000340413 FBXO10Q9UK96 956 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 YBX2Q9Y2T7 364 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 NPC1O15118 1278 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 GRM6O15303 877 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 HOXC11O43248 304 aaPredicted RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 AGTP01019 485 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 ASLP04424 464 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 CYBBP04839 570 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 MYBL2P10244 700 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 IBSPP21815 317 aaPredicted RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 GABRR2P28476 465 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 PLTPP55058 493 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 DHX9Q08211 1270 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 NAA30Q147X3 362 aaPredicted RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 PDGFRLQ15198 375 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 SPANXN3Q5MJ09 141 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 POTEHQ6S545 545 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 CCDC91Q7Z6B0 441 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 LCA5Q86VQ0 697 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 ARFGAP2Q8N6H7 521 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 FAM71DQ8N9W8 422 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 DTX3LQ8TDB6 740 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 FEM1CQ96JP0 617 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 MGME1Q9BQP7 344 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 DHRS4Q9BTZ2 278 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NEUROG2Q9H2A3 272 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NOL6Q9H6R4 1146 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms