RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 UBQLN1Q9UMX0 589 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 PLA2G4CQ9UP65 541 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 AP4E1Q9UPM8 1137 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 NUMBLQ9Y6R0 609 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 GOLGA8RI6L899 631 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 AP3B1O00203 1094 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 NVLO15381 856 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 MTSS1O43312 755 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 MBTPS2O43462 519 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 FKBP6O75344 327 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 H2AFYO75367 372 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 TM7SF2O76062 418 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 KLHL2O95198 593 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 NPTXRO95502 500 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 APRTP07741 180 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 RPSAP08865 295 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 CSH1P0DML2 217 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CSH2P0DML3 217 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 SKIP12755 728 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 DARSP14868 501 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 ARL4AP40617 200 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 PRKAA2P54646 552 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 UBE3AQ05086 875 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 AP1B1Q10567 949 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 PAFAH1B3Q15102 231 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 SPANXN3Q5MJ09 141 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 NCBP2-AS2Q69YL0 99 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 C1orf228Q6PIY5 440 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 ALKAL1Q6UXT8 129 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CDHR3Q6ZTQ4 885 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 NUDCD3Q8IVD9 361 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 WDR75Q8IWA0 830 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 ADHFE1Q8IWW8 467 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CTAGE3PQ8IX95 158 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 KLHDC8BQ8IXV7 354 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 EFHBQ8N7U6 833 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 COLGALT1Q8NBJ5 622 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 UBA3Q8TBC4 463 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 TFB1MQ8WVM0 346 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 HTR3CQ8WXA8 447 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 KCTD13Q8WZ19 329 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 ATP2A3Q93084 1043 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 PPP2R3CQ969Q6 453 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 NTAN1Q96AB6 310 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CFAP36Q96G28 342 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 PIWIL1Q96J94 861 aaKnown RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 ZNF668Q96K58 619 aaPredicted RBP11.04□□□□□ -0.64
RTN3-201ENST00000338850 MSLNLQ96KJ4 702 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CSPG4P5Q96PW8 444 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CCDC106Q9BWC9 280 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CWH43Q9H720 699 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 C10orf88Q9H8K7 445 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 SMYD2Q9NRG4 433 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 DNAJC28Q9NX36 388 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 ZFATQ9P243 1243 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 CD207Q9UJ71 328 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 MID2Q9UJV3 735 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 PCDHB12Q9Y5F1 795 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 PATJQ8NI35 1801 aa11.04□□□□□ -0.64
RTN3-201ENST00000338850 HMX2A2RU54 273 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 SDR42E2A6NKP2 422 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 CXorf49A8MYA2 514 aaPredicted RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 SPECC1L-ADORA2AF8WAN1 911 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 H3BRJ5 948 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 PIRO00625 290 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 SLC22A2O15244 555 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 NCAM2O15394 837 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 FGF18O76093 207 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 GLP2RO95838 553 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 SERPINE1P05121 402 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 KCNE1P15382 129 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 HADHAP40939 763 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 GARSP41250 739 aaKnown RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 MATKP42679 507 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 NRIP1P48552 1158 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 HCAR3P49019 387 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 NDUFV1P49821 464 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 ACTR3P61158 418 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 XIAPP98170 497 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 BTKQ06187 659 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 ZNF33AQ06730 810 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 KLC1Q07866 573 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 SCAPQ12770 1279 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 OVGP1Q12889 678 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 STX3Q13277 289 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 PDK1Q15118 436 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 SLC25A52Q3SY17 297 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 CCDC153Q494R4 210 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 ACSBG2Q5FVE4 666 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 SPOUT1Q5T280 376 aaKnown RBP11.03□□□□□ -0.64
RTN3-201ENST00000338850 SH3PXD2AQ5TCZ1 1133 aa11.03□□□□□ -0.64
RTN3-201ENST00000338850 TMCO4Q5TGY1 634 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms