RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ZNF211Q13398 564 aaPredicted RBP11.85□□□□□ -0.51
CSMD2-202ENST00000338325 SETMARQ53H47 684 aaPredicted RBP11.85□□□□□ -0.51
CSMD2-202ENST00000338325 FAM46CQ5VWP2 391 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 KDM7AQ6ZMT4 941 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 BEND5Q7L4P6 421 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 PPM1KQ8N3J5 372 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 FRS2Q8WU20 508 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 CCDC34Q96HJ3 373 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 BTN2A3PQ96KV6 586 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 LGMNQ99538 433 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 TRIM62Q9BVG3 475 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 RMND1Q9NWS8 449 aa11.85□□□□□ -0.51
CSMD2-202ENST00000338325 F5H5T6 163 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 PRAMEF26H0Y7S4 382 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 ERVH48-1M5A8F1 160 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 TRIM38O00635 465 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 MT-CO3P00414 261 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 RPL34P49207 117 aaKnown RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 PMS1P54277 932 aaKnown RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 PCBP4P57723 403 aaKnown RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 DAB2P98082 770 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 CFHR1Q03591 330 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 CNTN1Q12860 1018 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 COBLL1Q53SF7 1204 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 HS1BP3Q53T59 392 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 ZC3H12AQ5D1E8 599 aaKnown RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 TTC39BQ5VTQ0 682 aaPredicted RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 AGBL4Q5VU57 503 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 SYPL2Q5VXT5 272 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 ANKRD40Q6AI12 368 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 CIR1Q86X95 450 aaPredicted RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
CSMD2-202ENST00000338325 ZNF248Q8NDW4 579 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 KAT5Q92993 513 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 ST7Q9NRC1 585 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 SARDHQ9UL12 918 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 TENM4Q6N022 2769 aa11.84□□□□□ -0.51
CSMD2-202ENST00000338325 ATMQ13315 3056 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 TCAF2A6NFQ2 919 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 CAPN8A6NHC0 703 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 C1QTNF3-AMACRE9PGA6 284 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ALOX15BO15296 676 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 PMM2O15305 246 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 RNGTTO60942 597 aaKnown RBP11.83□□□□□ -0.52
CSMD2-202ENST00000338325 IGLV3-25P01717 112 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ACADSBP45954 432 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 PLK1P53350 603 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 OXCT1P55809 520 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 LRRC63Q05C16 580 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 PNOCQ13519 176 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 RABGAP1LQ5R372 815 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
CSMD2-202ENST00000338325 SLC25A45Q8N413 288 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ATP6V0D2Q8N8Y2 350 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 OR4C6Q8NH72 309 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ERCC4Q92889 916 aaPredicted RBP11.83□□□□□ -0.52
CSMD2-202ENST00000338325 KLHDC7BQ96G42 594 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF578Q96N58 590 aaPredicted RBP11.83□□□□□ -0.52
CSMD2-202ENST00000338325 PRMT1Q99873 361 aaKnown RBP11.83□□□□□ -0.52
CSMD2-202ENST00000338325 METTL14Q9HCE5 456 aaKnown RBP11.83□□□□□ -0.52
CSMD2-202ENST00000338325 PREBQ9HCU5 417 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 CA5BQ9Y2D0 317 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 PCDHB1Q9Y5F3 818 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 MGAQ8IWI9 3026 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF462Q96JM2 2506 aa11.83□□□□□ -0.52
CSMD2-202ENST00000338325 TRIM49BA6NDI0 452 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 KCNU1A8MYU2 1149 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 ATP9BO43861 1147 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 TRUB2O95900 331 aaKnown RBP11.82□□□□□ -0.52
CSMD2-202ENST00000338325 THEGLP0DJG4 465 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 DGKAP23743 735 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 GPD2P43304 727 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 TMPRSS3P57727 454 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 POM121L1PQ3SYA9 428 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 ACCSLQ4AC99 568 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 BROXQ5VW32 411 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 CDCP2Q5VXM1 449 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 CXorf57Q6NSI4 855 aaKnown RBP11.82□□□□□ -0.52
CSMD2-202ENST00000338325 TMEM145Q8NBT3 493 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 DEPDC7Q96QD5 511 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 SCAND2PQ9GZW5 306 aaPredicted RBP11.82□□□□□ -0.52
CSMD2-202ENST00000338325 POPDC2Q9HBU9 364 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.82□□□□□ -0.52
CSMD2-202ENST00000338325 SLC12A6Q9UHW9 1150 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 PPM1HQ9ULR3 514 aa11.82□□□□□ -0.52
CSMD2-202ENST00000338325 COL27A1Q8IZC6 1860 aaPredicted RBP11.82□□□□□ -0.52
CSMD2-202ENST00000338325 J3QKU1 62 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 MCF2LO15068 1137 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 FFAR2O15552 330 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 OPA1O60313 960 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 CKMT1AP12532 417 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF18P17022 549 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 UCNP55089 124 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 GABREP78334 506 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 PITX1P78337 314 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms