RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 MPP3Q13368 585 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CYLC2Q14093 348 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 FLOT2Q14254 428 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PDK3Q15120 406 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 OASLQ15646 514 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 RARS2Q5T160 578 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 NAPEPLDQ6IQ20 393 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PLEKHA7Q6IQ23 1121 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SPATA31D4Q6ZUB0 917 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CMC1Q7Z7K0 106 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 DCP1BQ8IZD4 617 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ANKLE1Q8NAG6 615 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 BRI3BPQ8WY22 251 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 DTNBP1Q96EV8 351 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MAML3Q96JK9 1138 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CCT7Q99832 543 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MTG1Q9BT17 334 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 RHOBTB2Q9BYZ6 727 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MAGEB5Q9BZ81 275 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SEMA6AQ9H2E6 1030 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 COPS7BQ9H9Q2 264 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ATP11BQ9Y2G3 1177 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MYO18AQ92614 2054 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ASCC3Q8N3C0 2202 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 RNF103-CHMP3A0A140T963 221 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 H0Y626 953 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PRPF4O43172 522 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TSPAN1O60635 241 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 NOL3O60936 208 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 MMP3P08254 477 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UNGP13051 313 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 NPR3P17342 541 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 IL1R2P27930 398 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 LHX1P48742 406 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 HARS2P49590 506 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CLCNKBP51801 687 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 MBTD1Q05BQ5 628 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CA9Q16790 459 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TAF2Q6P1X5 1199 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 RHBDF2Q6PJF5 856 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UNC5AQ6ZN44 842 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 C16orf59Q7L2K0 433 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TRIM74Q86UV6 250 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TRIM73Q86UV7 250 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TREML1Q86YW5 311 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 HS6ST3Q8IZP7 471 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SHCBP1Q8NEM2 672 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 GTF3C2Q8WUA4 911 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CD101Q93033 1021 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 BORCS6Q96GS4 357 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FIZ1Q96SL8 496 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 NIFKQ9BYG3 293 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 GPR63Q9BZJ6 419 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CATSPERBQ9H7T0 1116 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 POPDC2Q9HBU9 364 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ARHGAP26Q9UNA1 814 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TRIM17Q9Y577 477 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SLX4Q8IY92 1834 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DDX60LQ5H9U9 1706 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SYNDIG1LA6NDD5 238 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 B4GALT4O60513 344 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UGT1A9O60656 530 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SOAT2O75908 522 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FGFR1P11362 822 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DARSP14868 501 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 GRIA1P42261 906 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 KPNA2P52292 529 aaKnown RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 OGDHQ02218 1023 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CTBP1Q13363 440 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FSCBQ5H9T9 825 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SPDYAQ5MJ70 313 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ZNF470Q6ECI4 717 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TSHZ1Q6ZSZ6 1077 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 BBS12Q6ZW61 710 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 TAS1R3Q7RTX0 852 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DHDDSQ86SQ9 333 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 XYLT1Q86Y38 959 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 KBTBD2Q8IY47 623 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ANKRD52Q8NB46 1076 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 LMO3Q8TAP4 145 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 RSPH1Q8WYR4 309 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 MARK4Q96L34 752 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 KLHL5Q96PQ7 755 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FAM192AQ9GZU8 254 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 RNF208Q9H0X6 261 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ACSS3Q9H6R3 686 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 CAB39LQ9H9S4 337 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UGT1A7Q9HAW7 530 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UGT1A10Q9HAW8 530 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 UGT1A8Q9HAW9 530 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 FAM105AQ9NUU6 356 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 PLK2Q9NYY3 685 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 SUN2Q9UH99 717 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 RABGEF1Q9UJ41 708 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 DLEC1Q9Y238 1755 aa6.6□□□□□ -1.35
HMG20A-201ENST00000336216 ARHGAP10A1A4S6 786 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms