RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NUMBP49757 651 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 YBEYP58557 167 aaPredicted RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 MRPS25P82663 173 aaKnown RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 CDH18Q13634 790 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 POLD3Q15054 466 aaPredicted RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 FAM182AQ5T1J6 154 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 ASTLQ6HA08 431 aaPredicted RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 BZW1Q7L1Q6 419 aaKnown RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 YAF2Q8IY57 180 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 OR7D4Q8NG98 312 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 FIBINQ8TAL6 211 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 HDAC11Q96DB2 347 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 TMEM121Q9BTD3 319 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 TRMT61BQ9BVS5 477 aaKnown RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 ECT2Q9H8V3 914 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 PCYOX1Q9UHG3 505 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 AMACRQ9UHK6 382 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 DRG1Q9Y295 367 aaKnown RBP22.03■■□□□ 1.12
TPM1-204ENST00000334895 NCAM2O15394 837 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 HOXC11O43248 304 aaPredicted RBP22.02■■□□□ 1.12
TPM1-204ENST00000334895 ADH1CP00326 375 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 ITGAVP06756 1048 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 MX2P20592 715 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 MZF1P28698 734 aaPredicted RBP22.02■■□□□ 1.12
TPM1-204ENST00000334895 PTGIRP43119 386 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 PPIDQ08752 370 aaKnown RBP22.02■■□□□ 1.12
TPM1-204ENST00000334895 PARP15Q460N3 678 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 SLC45A4Q5BKX6 768 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 C12orf40Q86WS4 652 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 ARHGEF2Q92974 986 aaKnown RBP22.02■■□□□ 1.12
TPM1-204ENST00000334895 ALG14Q96F25 216 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 MAGEH1Q9H213 219 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 USP29Q9HBJ7 922 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 LIMD1Q9UGP4 676 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 OR51B4Q9Y5P0 310 aa22.02■■□□□ 1.12
TPM1-204ENST00000334895 BCLAF3A2AJT9 711 aaKnown RBP22.02■■□□□ 1.11
TPM1-204ENST00000334895 PPP1R12AO14974 1030 aaPredicted RBP22.02■■□□□ 1.11
TPM1-204ENST00000334895 RBL1P28749 1068 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 CD70P32970 193 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 GDF10P55107 478 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 LMAN2Q12907 356 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 RNF219Q5W0B1 726 aaPredicted RBP22.02■■□□□ 1.11
TPM1-204ENST00000334895 DARS2Q6PI48 645 aaKnown RBP22.02■■□□□ 1.11
TPM1-204ENST00000334895 TFB1MQ8WVM0 346 aaKnown RBP22.02■■□□□ 1.11
TPM1-204ENST00000334895 KCNK12Q9HB15 430 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 GTSE1Q9NYZ3 720 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 ZNF148Q9UQR1 794 aa22.02■■□□□ 1.11
TPM1-204ENST00000334895 HACD1B0YJ81 288 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 CACNG3O60359 315 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 MAFKO60675 156 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 HLA-FP30511 346 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 CSKP41240 450 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 NRLP54845 237 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 GAD2Q05329 585 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 SERINC3Q13530 473 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 RUNX3Q13761 415 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 ZNF783Q6ZMS7 281 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 CDKL3Q8IVW4 592 aaPredicted RBP22.01■■□□□ 1.11
TPM1-204ENST00000334895 CCDC105Q8IYK2 499 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 PLCD3Q8N3E9 789 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 ATPAF2Q8N5M1 289 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 NAT16Q8N8M0 369 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 GLIS1Q8NBF1 620 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 CCNYQ8ND76 341 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 ATL2Q8NHH9 583 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 CHFRQ96EP1 664 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 NECAB3Q96P71 396 aaPredicted RBP22.01■■□□□ 1.11
TPM1-204ENST00000334895 TSGA13Q96PP4 275 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 ACE2Q9BYF1 805 aaPredicted RBP22.01■■□□□ 1.11
TPM1-204ENST00000334895 FBXO10Q9UK96 956 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 NEU2Q9Y3R4 380 aa22.01■■□□□ 1.11
TPM1-204ENST00000334895 COL4A2P08572 1712 aa22■■□□□ 1.11
TPM1-204ENST00000334895 ARHGAP42A6NI28 874 aa22■■□□□ 1.11
TPM1-204ENST00000334895 TRIM24O15164 1050 aa22■■□□□ 1.11
TPM1-204ENST00000334895 RAD51CO43502 376 aa22■■□□□ 1.11
TPM1-204ENST00000334895 AP1B1Q10567 949 aa22■■□□□ 1.11
TPM1-204ENST00000334895 PRUNE1Q86TP1 453 aa22■■□□□ 1.11
TPM1-204ENST00000334895 ETFBKMTQ8IXQ9 262 aa22■■□□□ 1.11
TPM1-204ENST00000334895 ALLCQ8N6M5 410 aa22■■□□□ 1.11
TPM1-204ENST00000334895 TTC8Q8TAM2 541 aa22■■□□□ 1.11
TPM1-204ENST00000334895 SLCO2A1Q92959 643 aa22■■□□□ 1.11
TPM1-204ENST00000334895 CCDC114Q96M63 670 aa22■■□□□ 1.11
TPM1-204ENST00000334895 FEM1AQ9BSK4 669 aa22■■□□□ 1.11
TPM1-204ENST00000334895 LRRC1Q9BTT6 524 aa22■■□□□ 1.11
TPM1-204ENST00000334895 BRD8Q9H0E9 1235 aa22■■□□□ 1.11
TPM1-204ENST00000334895 IPO11Q9UI26 975 aaKnown RBP22■■□□□ 1.11
TPM1-204ENST00000334895 INTS6Q9UL03 887 aaKnown RBP22■■□□□ 1.11
TPM1-204ENST00000334895 NCOR1O75376 2440 aa22■■□□□ 1.11
TPM1-204ENST00000334895 TICRRQ7Z2Z1 1910 aa22■■□□□ 1.11
TPM1-204ENST00000334895 J3KR12 359 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 TTI1O43156 1089 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 PEX11BO96011 259 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 GLDCP23378 1020 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 DR1Q01658 176 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 ZP2Q05996 745 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 ADHFE1Q8IWW8 467 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 APCDD1Q8J025 514 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 CPA6Q8N4T0 437 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 FAM71DQ8N9W8 422 aa21.99■■□□□ 1.11
TPM1-204ENST00000334895 MUC3BQ9H195 1237 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms