RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PRIM2P49643 509 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 APLP1P51693 650 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 SLC5A3P53794 718 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ITGA9Q13797 1035 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ZNF618Q5T7W0 954 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 SLC22A9Q8IVM8 553 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CFAP52Q8N1V2 620 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 LRRN4Q8WUT4 740 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CAVIN3Q969G5 261 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 FAM162AQ96A26 154 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CPNE1Q99829 537 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 FAF1Q9UNN5 650 aaPredicted RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 TMEM191CA6NGB0 347 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 RAD51BO15315 384 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 LIASO43766 372 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ADRA1BP35368 520 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 RFX3P48380 749 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CCNG1P51959 295 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 PCID2Q5JVF3 399 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ATAT1Q5SQI0 421 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 LONP2Q86WA8 852 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 SUGP1Q8IWZ8 645 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 AGGF1Q8N302 714 aaeCLIP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 FBXO39Q8N4B4 442 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 NETO2Q8NC67 525 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CXorf40AQ8TE69 158 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 NDRG1Q92597 394 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 GAS2L1Q99501 681 aaPredicted RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 BRD9Q9H8M2 597 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MYO1GB0I1T2 1018 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CRABP2P29373 138 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 RPL22P35268 128 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ABL2P42684 1182 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 RAD23BP54727 409 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CRADDP78560 199 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 SKOR1P84550 965 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 GRB14Q14449 540 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 VARS2Q5ST30 1063 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MARK2Q7KZI7 788 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 FBXO22Q8NEZ5 403 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ACBD6Q9BR61 282 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ASB8Q9H765 288 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CDHR5Q9HBB8 845 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 STX18Q9P2W9 335 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 HEY2Q9UBP5 337 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 FAM50BQ9Y247 325 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 FAM208AQ9UK61 1670 aaKnown RBP15.27■□□□□ 0.04
C9orf47-201ENST00000334490 hCG_1818297A0A087WSY0 165 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 SYN3O14994 580 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 MTA2O94776 668 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 MAPK1P28482 360 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 OLFML2BQ68BL8 750 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 KDM7AQ6ZMT4 941 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 STRADAQ7RTN6 431 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 ST13P4Q8IZP2 240 aaPredicted RBP15.27■□□□□ 0.04
C9orf47-201ENST00000334490 BCAS3Q9H6U6 928 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 RAD54BQ9Y620 910 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 RPL17P18621 184 aaKnown RBP15.27■□□□□ 0.04
C9orf47-201ENST00000334490 BGNP21810 368 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 FLT3P36888 993 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 NME5P56597 212 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 XRCC4Q13426 336 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 PHKG1Q16816 387 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 ZCCHC9Q8N567 271 aaKnown RBP15.27■□□□□ 0.04
C9orf47-201ENST00000334490 NMRAL1Q9HBL8 299 aa15.27■□□□□ 0.04
C9orf47-201ENST00000334490 KRT6AP02538 564 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 KRT6BP04259 564 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 KRT6CP48668 564 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 PRKCQQ04759 706 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 NR6A1Q15406 480 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 KBTBD12Q3ZCT8 623 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 NSL1Q96IY1 281 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 CATSPERZQ9NTU4 200 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 DTNAQ9Y4J8 743 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 FAM153BP0C7A2 387 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 PIRTP0C851 137 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 GCKP35557 465 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 ABCG1P45844 678 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 PFKPQ01813 784 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 FAM153CQ494X1 144 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 GET4Q7L5D6 327 aaPredicted RBP15.27■□□□□ 0.03
C9orf47-201ENST00000334490 BTN2A3PQ96KV6 586 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 MAGEB18Q96M61 343 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 C11orf49Q9H6J7 331 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 Q9Y3F1 56 aa15.27■□□□□ 0.03
C9orf47-201ENST00000334490 BTN3A1O00481 513 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 CHADO15335 359 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 KATNA1O75449 491 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ADH1CP00326 375 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 SLC44A2Q8IWA5 706 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-201ENST00000334490 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 MYBPHLA2RUH7 354 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 BTNL10A8MVZ5 291 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 NEDD8-MDP1E9PL57 170 aa15.26■□□□□ 0.03
C9orf47-201ENST00000334490 F8W810 466 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms