RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TPSB2P20231 275 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 GP5P40197 560 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 ENTPD1P49961 510 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 IGBP1P78318 339 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 TPSAB1Q15661 275 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 DLG2Q15700 870 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 LSM12Q3MHD2 195 aaKnown RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 SEL1L3Q68CR1 1132 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 CYP4V2Q6ZWL3 525 aaPredicted RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 PATL1Q86TB9 770 aaKnown RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 DCLK2Q8N568 766 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 SMYD1Q8NB12 490 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 RP9Q8TA86 221 aaKnown RBP14.01□□□□□ -0.17
SYNE3-201ENST00000334258 PGLYRP2Q96PD5 576 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 COQ10BQ9H8M1 238 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 CAB39LQ9H9S4 337 aa14.01□□□□□ -0.17
SYNE3-201ENST00000334258 GPD2P43304 727 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 MAGEA3P43357 314 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 MAGEA6P43360 314 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CDH15P55291 814 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 ESRRGP62508 458 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 SURF1Q15526 300 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 INSCQ1MX18 579 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CCDC153Q494R4 210 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 PIGGQ5H8A4 983 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 IL23RQ5VWK5 629 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 BORAQ6PGQ7 559 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 C4orf22Q6V702 233 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 ZPBP2Q6X784 338 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 ILDR2Q71H61 639 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CDHR1Q96JP9 859 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 KLHL32Q96NJ5 620 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 NPAS2Q99743 824 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF214Q9UL59 606 aaPredicted RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 MYRFQ9Y2G1 1151 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 A0A096LPK6 155 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 PTK2BQ14289 1009 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CCDC14Q49A88 953 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 GET4Q7L5D6 327 aaPredicted RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 STRA8Q7Z7C7 330 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CLVS1Q8IUQ0 354 aaPredicted RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 APOBEC3FQ8IUX4 373 aaKnown RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 CCNYQ8ND76 341 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 GIPC3Q8TF64 312 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 DLG3Q92796 817 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 RMND5BQ96G75 393 aaPredicted RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 MAGEB5Q9BZ81 275 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 WDR37Q9Y2I8 494 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 INO80B-WBP1J3KQ70 363 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 GCATO75600 419 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 H6PDO95479 791 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 STAMBPO95630 424 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 PRKCGP05129 697 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 PRKCBP05771 671 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 ZNF23P17027 643 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CCR10P46092 362 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CDK9P50750 372 aaKnown RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 NAA20P61599 178 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 XRRA1Q6P2D8 792 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 SLC15A3Q8IY34 581 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 PCDH20Q8N6Y1 951 aaKnown RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 COLGALT1Q8NBJ5 622 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 CLIP3Q96DZ5 547 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 SCYL1Q96KG9 808 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 AGAP3Q96P47 875 aa14□□□□□ -0.17
SYNE3-201ENST00000334258 GATA5Q9BWX5 397 aaPredicted RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 INO80BQ9C086 356 aaPredicted RBP14□□□□□ -0.17
SYNE3-201ENST00000334258 FER1L6Q2WGJ9 1857 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 HDAC3O15379 428 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 FOXD2O60548 495 aaPredicted RBP13.99□□□□□ -0.17
SYNE3-201ENST00000334258 LTFP02788 710 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 ITGB3P05106 788 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 MGAT5BQ3V5L5 792 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 KCTD21Q4G0X4 260 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 SCUBE3Q8IX30 993 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 PGAM4Q8N0Y7 254 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 RIN3Q8TB24 985 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 LGMNQ99538 433 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM134Q9H6X4 195 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 PLGRKTQ9HBL7 147 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 FIS1Q9Y3D6 152 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 AP4S1Q9Y587 144 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 CSADQ9Y600 493 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 DYTNA2CJ06 578 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 C7orf72A4D263 438 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 PIGNO95427 931 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 POLBP06746 335 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 PDGFRBP09619 1106 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 HOXC6P09630 235 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 TFPTP0C1Z6 253 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 CXCL8P10145 99 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 PGAM1P18669 254 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 GLDCP23378 1020 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 CCR3P51677 355 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 NIPAL4Q0D2K0 466 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 SLC9A4Q6AI14 798 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 ZBTB8OSQ8IWT0 167 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 PPP1R14BQ96C90 147 aa13.99□□□□□ -0.17
SYNE3-201ENST00000334258 CIB1Q99828 191 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms