RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 FBXW8Q8N3Y1 598 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 CPXM1Q96SM3 734 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 CCDC90BQ9GZT6 254 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 NIF3L1Q9GZT8 377 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 PSMD13Q9UNM6 376 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 AP4E1Q9UPM8 1137 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 LINC00854A0A1B0GVQ3 168 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 PMM2O15305 246 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 KRT8P05787 483 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 HMGCS2P54868 508 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SLFN12LQ6IEE8 588 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 RELL1Q8IUW5 271 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 KCNK4Q9NYG8 393 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SEPT10Q9P0V9 454 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 ARHGAP28Q9P2N2 729 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 USP18Q9UMW8 372 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 MYO18AQ92614 2054 aaKnown RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 PRPSAP2O60256 369 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 FBXO21O94952 628 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 RBL1P28749 1068 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SESN2P58004 480 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 PHC1P78364 1004 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 CLPPQ16740 277 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 PHKG1Q16816 387 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 LGSNQ5TDP6 509 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 FRMD7Q6ZUT3 714 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 GATAD2AQ86YP4 633 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 MARVELD2Q8N4S9 558 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 DACT3Q96B18 629 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SLC38A10Q9HBR0 1119 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 GINS2Q9Y248 185 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 BTBD19C9JJ37 291 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 PDGFRAP16234 1089 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 EPHA3P29320 983 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 ALDH4A1P30038 563 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 ABCG1P45844 678 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 BCAR1P56945 870 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 PRKD1Q15139 912 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 DUOXA2Q1HG44 320 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 XKR3Q5GH77 459 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 RSBN1LQ6PCB5 846 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 C15orf39Q6ZRI6 1047 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SLC26A11Q86WA9 606 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 SERPINI1Q99574 410 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 FRMD8Q9BZ67 464 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 RBM38Q9H0Z9 239 aaKnown RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 TP63Q9H3D4 680 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 RNF19AQ9NV58 838 aa12.1□□□□□ -0.47
LIMK2-202ENST00000333611 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
LIMK2-202ENST00000333611 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 A8MV72 311 aaPredicted RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 TNNC2P02585 160 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 GFAPP14136 432 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 OSBPP22059 807 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ADSLP30566 484 aaPredicted RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 IQSEC1Q6DN90 963 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 CES3Q6UWW8 571 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ZBTB49Q6ZSB9 765 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 CYP4V2Q6ZWL3 525 aaPredicted RBP12.09□□□□□ -0.47
LIMK2-202ENST00000333611 USP43Q70EL4 1123 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 DSG4Q86SJ6 1040 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 SNX32Q86XE0 403 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 CCDC103Q8IW40 242 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ALDH16A1Q8IZ83 802 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 PHTF2Q8N3S3 785 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ATP6V1E2Q96A05 226 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 DMRTB1Q96MA1 342 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 BEGAINQ9BUH8 593 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ADNPQ9H2P0 1102 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ABCB10Q9NRK6 738 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 PNPOQ9NVS9 261 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 HMGXB4Q9UGU5 601 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 H6PDO95479 791 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 GRIA1P42261 906 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ADRM1Q16186 407 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 IRGQQ8WZA9 623 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 CMTM5Q96DZ9 223 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 DGCR6LQ9BY27 220 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 EPB41L1Q9H4G0 881 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ERBB2P04626 1255 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 PLCL1Q15111 1095 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 ZNF667Q5HYK9 610 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
LIMK2-202ENST00000333611 NEPROQ6NW34 567 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms