RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PANK2Q9BZ23 570 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 STRADBQ9C0K7 418 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 CUEDC2Q9H467 287 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 CUEDC1Q9NWM3 386 aaPredicted RBP15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 MARCH2Q9P0N8 246 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 SALL4Q9UJQ4 1053 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 STRIP2Q9ULQ0 834 aa15.3■□□□□ 0.04
CTHRC1-201ENST00000330295 PRAMEF33A0A0G2JMD5 474 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 TTC34A8MYJ7 566 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 NTN3O00634 580 aaPredicted RBP15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 SLC7A4O43246 635 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 PRAMEF10O60809 474 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 SEMA7AO75326 666 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 ASLP04424 464 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 FAM200BP0CF97 657 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 GNLYP22749 145 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 MZF1P28698 734 aaPredicted RBP15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 KIF11P52732 1056 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 MLLT10P55197 1068 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 CLEC20AQ6ZU45 233 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 CBWD2Q8IUF1 395 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 SLC22A18ASQ8N1D0 253 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 STK40Q8N2I9 435 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 NAT6Q93015 286 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 CCDC3Q9BQI4 270 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 XYLT2Q9H1B5 865 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 CSNK1G3Q9Y6M4 447 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 NF1P21359 2839 aa15.29■□□□□ 0.04
CTHRC1-201ENST00000330295 A0A087X0B3 334 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 TMX2-CTNND1H3BSU7 103 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 SLC31A1O15431 190 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 VPS4BO75351 444 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 CSKP41240 450 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 METAP1P53582 386 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 MYL6P60660 151 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 NUCB2P80303 420 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 PKP1Q13835 747 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 PDILTQ8N807 584 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 PNPLA8Q9NP80 782 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 FAM49BQ9NUQ9 324 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 FOXJ2Q9P0K8 574 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 RCOR1Q9UKL0 485 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 VPS4AQ9UN37 437 aa15.28■□□□□ 0.04
CTHRC1-201ENST00000330295 ITIH6Q6UXX5 1313 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 A0A1W2PQC6 194 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 KIAA0391O15091 583 aaKnown RBP15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 GCNT3O95395 438 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 PRKCGP05129 697 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 DLATP10515 647 aaKnown RBP15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 IDEP14735 1019 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 PRLRP16471 622 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 ADORA2BP29275 332 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 ATICP31939 592 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 SGSHP51688 502 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 KLRB1Q12918 225 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 TRIP4Q15650 581 aaPredicted RBP15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 DEFB133Q30KQ1 61 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 STXBP4Q6ZWJ1 553 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 CCDC65Q8IXS2 484 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 C12orf29Q8N999 325 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 LMLNQ96KR4 655 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 SPATA32Q96LK8 384 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 NOX5Q96PH1 765 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 FOXP3Q9BZS1 431 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 SCAND2PQ9GZW5 306 aaPredicted RBP15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 TNMDQ9H2S6 317 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 PREBQ9HCU5 417 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 TBC1D7Q9P0N9 293 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 STOML2Q9UJZ1 356 aa15.27■□□□□ 0.04
CTHRC1-201ENST00000330295 PCNX1Q96RV3 2341 aa15.27■□□□□ 0.03
CTHRC1-201ENST00000330295 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 H3BM21 787 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 TNNI1P19237 187 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 ITIH1P19827 911 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 CD82P27701 267 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 RPIAP49247 311 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 CASP5P51878 434 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 TRPC3Q13507 836 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 ELAVL3Q14576 367 aaKnown RBP15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 BMT2Q1RMZ1 405 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 ADGRF1Q5T601 910 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 ZNF557Q8N988 423 aaPredicted RBP15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 PTPRN2Q92932 1015 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 DHX58Q96C10 678 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 MOCOSQ96EN8 888 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 CGRRF1Q99675 332 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 FZD3Q9NPG1 666 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 INTS6Q9UL03 887 aaKnown RBP15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 PCDHA7Q9UN72 937 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 ERVW-1Q9UQF0 538 aa15.26■□□□□ 0.03
CTHRC1-201ENST00000330295 LOXL2Q9Y4K0 774 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms