RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 XIRP2A4UGR9 3374 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 BCLAF3A2AJT9 711 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 HMGB1P1B2RPK0 211 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 LATS1O95835 1130 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 WEE1P30291 646 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 HOXC13P31276 330 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 IFFO1Q0D2I5 559 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 SLC29A2Q14542 456 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 RNASEH2BQ5TBB1 312 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 LGI2Q8N0V4 545 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 OR2W6PQ8NHA6 318 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 RTP4Q96DX8 246 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 CDC42EP4Q9H3Q1 356 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 UBE2ZQ9H832 354 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 MPP6Q9NZW5 540 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 DOCK8Q8NF50 2099 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 IGLV3-10A0A075B6K4 115 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 F5H5T6 163 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 H7C0C1 242 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 DCLK1O15075 740 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 ERCC2P18074 760 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 KCNA5P22460 613 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 RPL22P35268 128 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 VIPR2P41587 438 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 ATP5OP48047 213 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 SKIV2LQ15477 1246 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 BZW1Q7L1Q6 419 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 HOOK3Q86VS8 718 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 CIR1Q86X95 450 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 ST13P5Q8NFI4 369 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 FAM76AQ8TAV0 307 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 SMARCD2Q92925 531 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 ATP6V1G3Q96LB4 118 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 PRICKLE1Q96MT3 831 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 LRRC3BQ96PB8 259 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 TMEM109Q9BVC6 243 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 PHACTR1Q9C0D0 580 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 PSD3Q9NYI0 1048 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 FARP1Q9Y4F1 1045 aaPredicted RBP19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 HEY1Q9Y5J3 304 aa19.25■□□□□ 0.67
EXOSC3-201ENST00000327304 E2F8A0AVK6 867 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 TSPAN3O60637 253 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 TCF3P15923 654 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 HTR7P34969 479 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 SGSHP51688 502 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 GYS2P54840 703 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 ACBD5Q5T8D3 534 aaPredicted RBP19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 AGBL2Q5U5Z8 902 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 NCBP2-AS2Q69YL0 99 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 LRRC31Q6UY01 552 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 ZC3H18Q86VM9 953 aaKnown RBP19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 CELF5Q8N6W0 485 aaKnown RBP19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 FAM71DQ8N9W8 422 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 SUSD6Q92537 303 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 RPRD1AQ96P16 312 aaPredicted RBP19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 USP29Q9HBJ7 922 aa19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 SPTBN5Q9NRC6 3674 aaKnown RBP19.24■□□□□ 0.67
EXOSC3-201ENST00000327304 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 GRXCR2A6NFK2 248 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 DRGXA6NNA5 263 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 CNTN5O94779 1100 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 TTC4O95801 387 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 ALFQ53S48 1182 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 C4orf22Q6V702 233 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 CDKL3Q8IVW4 592 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 FAM217AQ8IXS0 508 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 PPIL6Q8IXY8 311 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 CFAP52Q8N1V2 620 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 NETO2Q8NC67 525 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 KIF9Q9HAQ2 790 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 PPARGC1AQ9UBK2 798 aaKnown RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 ZNF510Q9Y2H8 683 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 GFRA2O00451 464 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 FCARP24071 287 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 GBP2P32456 591 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 RPS24P62847 133 aaKnown RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 GBE1Q04446 702 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 PRCCQ92733 491 aaPredicted RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 NECTIN4Q96NY8 510 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 RBM15Q96T37 977 aaKnown RBP eCLIP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 DDX50Q9BQ39 737 aaKnown RBP19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 ZYG11BQ9C0D3 744 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 TRPV4Q9HBA0 871 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 PAK5Q9P286 719 aa19.23■□□□□ 0.67
EXOSC3-201ENST00000327304 DOCK4Q8N1I0 1966 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 FGF10O15520 208 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 MFSD11O43934 449 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 MAP3K6O95382 1288 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 ACTN2P35609 894 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 KRT71Q3SY84 523 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 C5orf22Q49AR2 442 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 EMC10Q5UCC4 262 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 TFAP2DQ7Z6R9 452 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 NPWQ8N729 165 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 NAT8LQ8N9F0 302 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 P2RY11Q96G91 374 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 ROPN1BQ9BZX4 212 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms