RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 OR7D4Q8NG98 312 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 UBE2Q2Q8WVN8 375 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 APBB2Q92870 758 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 ZNF689Q96CS4 500 aaPredicted RBP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 TMEM169Q96HH4 297 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 FUBP3Q96I24 572 aaKnown RBP eCLIP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 ZNF317Q96PQ6 595 aaPredicted RBP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 CAB39LQ9H9S4 337 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 PNPLA8Q9NP80 782 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 MTRRQ9UBK8 725 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 HCFC2Q9Y5Z7 792 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 ZNF840PA6NDX5 716 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 C2orf71A6NGG8 1288 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 GOLGA8CPA6NN73 597 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 DNAJC6O75061 913 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 RFPL2O75678 378 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 F9P00740 461 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 TIMP1P01033 207 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 CNPP09543 421 aaKnown RBP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 ZFXP17010 805 aaPredicted RBP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 XRCC4Q13426 336 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 EML3Q32P44 896 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 TEX44Q53QW1 395 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 FAM133BQ5BKY9 247 aaKnown RBP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 SPDYCQ5MJ68 293 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 CGB2Q6NT52 195 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 PCGF5Q86SE9 256 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 SLC39A11Q8N1S5 342 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 PGBD5Q8N414 524 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 ATPAF2Q8N5M1 289 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 PRICKLE1Q96MT3 831 aaPredicted RBP7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 TOX2Q96NM4 488 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 TLR6Q9Y2C9 796 aa7.15□□□□□ -1.26
LYSMD3-201ENST00000315948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 OR6C75A6NL08 312 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 TRIM49D1C9J1S8 452 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 AURKAO14965 403 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 PPP1R12AO14974 1030 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 PEX11BO96011 259 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 CA4P22748 312 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 NMBRP28336 390 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 MSH2P43246 934 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ERVFC1P60507 584 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 DSC2Q02487 901 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ITKQ08881 620 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 GREB1Q4ZG55 1949 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 CMC1Q7Z7K0 106 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 CHSY1Q86X52 802 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 RNF168Q8IYW5 571 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 LGI2Q8N0V4 545 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 SPATA6LQ8N4H0 392 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 KLHL23Q8NBE8 558 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 WFDC5Q8TCV5 224 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 DYDC1Q8WWB3 177 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 EBNA1BP2Q99848 306 aaKnown RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ELAC2Q9BQ52 826 aaKnown RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 FRMD8P1Q9BZ68 369 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 FAM129AQ9BZQ8 928 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 NT5MQ9NPB1 228 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 RBM22Q9NW64 420 aaKnown RBP eCLIP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 CLEC4EQ9ULY5 219 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 YIPF1Q9Y548 306 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 KCTD3Q9Y597 815 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 RPS6KL1Q9Y6S9 549 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 CCDC195A0A1B0GUA6 201 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 GMNCA6NCL1 334 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 PRRG1O14668 218 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 SAT1P21673 171 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 DRD4P21917 467 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 OVGP1Q12889 678 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 FSCBQ5H9T9 825 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 EMC10Q5UCC4 262 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 C16orf46Q6P387 395 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 POTEHQ6S545 545 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 LDB1Q86U70 411 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ARL14EPQ8N8R7 260 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ZNF461Q8TAF7 563 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 RIN3Q8TB24 985 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 TCP10LQ8TDR4 215 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 SH3RF2Q8TEC5 729 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 TBC1D31Q96DN5 1066 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 TEKT5Q96M29 485 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 SERPINB11Q96P15 392 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 MRPL9Q9BYD2 267 aaKnown RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ROPN1BQ9BZX4 212 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 ROPN1Q9HAT0 212 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 RCOR3Q9P2K3 495 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 PSMC3IPQ9P2W1 217 aaPredicted RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 LGALS13Q9UHV8 139 aa7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 IPO11Q9UI26 975 aaKnown RBP7.15□□□□□ -1.27
LYSMD3-201ENST00000315948 TANC1Q9C0D5 1861 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 FAM92AA1XBS5 289 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 PER2O15055 1255 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 ABHD2P08910 425 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 IRS1P35568 1242 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 RGRP47804 291 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 NIPAL4Q0D2K0 466 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 CRYMQ14894 314 aa7.14□□□□□ -1.27
LYSMD3-201ENST00000315948 HSP90AA5PQ58FG0 334 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms