RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TRAPPC9Q96Q05 1148 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 HEY2Q9UBP5 337 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 SEPT9Q9UHD8 586 aaPredicted RBP8.02□□□□□ -1.12
CNOT4-201ENST00000315544 IPO11Q9UI26 975 aaKnown RBP8.02□□□□□ -1.12
CNOT4-201ENST00000315544 TSPAN16Q9UKR8 245 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 IKZF3Q9UKT9 509 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 RAD54BQ9Y620 910 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 ARVCFO00192 962 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 USP1O94782 785 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 PRKCBP05771 671 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 KRT7P08729 469 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 KRT3P12035 628 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 MTHFD2P13995 350 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 MARK3P27448 753 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 STAT5BP51692 787 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 IRX3P78415 501 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-201ENST00000315544 XIAPP98170 497 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 PFKPQ01813 784 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 STXBP2Q15833 593 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 SLC25A52Q3SY17 297 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 ZNF658BQ4V348 819 aaPredicted RBP8.02□□□□□ -1.13
CNOT4-201ENST00000315544 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 CLEC20AQ6ZU45 233 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 DET1Q7L5Y6 550 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TMC7Q7Z402 723 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 ANKMY2Q8IV38 441 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 SEPT1Q8WYJ6 367 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 RSPH1Q8WYR4 309 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 MRRFQ96E11 262 aaKnown RBP8.02□□□□□ -1.13
CNOT4-201ENST00000315544 SLC39A13Q96H72 371 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 LRRC37BQ96QE4 947 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 OLAHQ9NV23 265 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 H3BNC9 293 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TNPO2O14787 897 aaKnown RBP8.02□□□□□ -1.13
CNOT4-201ENST00000315544 DAB1O75553 588 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TIMP1P01033 207 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 LGALS2P05162 132 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 ELNP15502 786 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 ATP5DP30049 168 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 MRPL58Q14197 206 aaKnown RBP8.02□□□□□ -1.13
CNOT4-201ENST00000315544 KLHL38Q2WGJ6 581 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 SLC9B1Q4ZJI4 515 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 C4orf22Q6V702 233 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 HFE2Q6ZVN8 426 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TMPRSS6Q8IU80 811 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 CEP97Q8IW35 865 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TTC13Q8NBP0 860 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TMEM35BQ8NCS4 154 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 OR13J1Q8NGT2 312 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 GSDMBQ8TAX9 411 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 NSL1Q96IY1 281 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 MEAF6Q9HAF1 191 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TXLNGQ9NUQ3 528 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TMEM181Q9P2C4 612 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 KCNG1Q9UIX4 513 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 PCDHB4Q9Y5E5 795 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 TET1Q8NFU7 2136 aa8.02□□□□□ -1.13
CNOT4-201ENST00000315544 A0A1B0GTL3 188 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 SPOPO43791 374 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 LTFP02788 710 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 LYNP07948 512 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 ARSAP15289 507 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 PTPN3P26045 913 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 ADCY8P40145 1251 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CXCR3P49682 368 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 LIMK2P53671 638 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CEACAM7Q14002 265 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 SYPL2Q5VXT5 272 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 ANKRD52Q8NB46 1076 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 STKLD1Q8NE28 680 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 MICAL1Q8TDZ2 1067 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 SCG3Q8WXD2 468 aaKnown RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 THOC1Q96FV9 657 aaKnown RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 EBF3Q9H4W6 596 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 LRCH1Q9Y2L9 728 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 EXOC1LA0A1B0GW35 172 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 K7ERI5 159 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 MAFKO60675 156 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 PARNO95453 639 aaKnown RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 TSPAN12O95859 305 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 GAS8O95995 478 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CNTFP26441 200 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 HOXD11P31277 338 aaPredicted RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 IL9RQ01113 521 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 RANBP10Q6VN20 620 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CENPUQ71F23 418 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 SMOQ99835 787 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 SPATA16Q9BXB7 569 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 NPHS2Q9NP85 383 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CDH22Q9UJ99 828 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 ANKRD6Q9Y2G4 727 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CEPT1Q9Y6K0 416 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 M0QZQ0 153 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 KRT18P05783 430 aaKnown RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 GPD1P21695 349 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 KCNA5P22460 613 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 PCSK6P29122 969 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms