RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 LOXL4Q96JB6 756 aa18.28■□□□□ 0.52
CCS-201ENST00000310190 PSMB7Q99436 277 aa18.28■□□□□ 0.52
CCS-201ENST00000310190 SNRNP25Q9BV90 132 aaKnown RBP18.28■□□□□ 0.52
CCS-201ENST00000310190 R4GN57 208 aa18.28■□□□□ 0.52
CCS-201ENST00000310190 ZNF217O75362 1048 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 ZMPSTE24O75844 475 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 LMNAP02545 664 aaKnown RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 RHOCP08134 193 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 CYLC1P35663 651 aaPredicted RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 COPAP53621 1224 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 KRT83P78385 493 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 SLC25A11Q02978 314 aaKnown RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 USP39Q53GS9 565 aaKnown RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 RNF219Q5W0B1 726 aaPredicted RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 PYROXD2Q8N2H3 581 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 OR2T3Q8NH03 318 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 FRS2Q8WU20 508 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 CYB5D2Q8WUJ1 264 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 CALR3Q96L12 384 aaKnown RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 MRGPRX1Q96LB2 322 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 MAGEB5Q9BZ81 275 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 CATSPERBQ9H7T0 1116 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 ZDHHC4Q9NPG8 344 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 SPTLC3Q9NUV7 552 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 CTTNBP2NLQ9P2B4 639 aa18.27■□□□□ 0.52
CCS-201ENST00000310190 RCOR3Q9P2K3 495 aaPredicted RBP18.27■□□□□ 0.52
CCS-201ENST00000310190 NUP205Q92621 2012 aa18.27■□□□□ 0.51
CCS-201ENST00000310190 A0A0A6YYK5 440 aaPredicted RBP18.26■□□□□ 0.51
CCS-201ENST00000310190 EDDM13A0A1B0GTR0 161 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 TCRBV21S2A2A0A5A6 115 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 PRR23AA6NEV1 266 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 SYNCRIPO60506 623 aaKnown RBP18.26■□□□□ 0.51
CCS-201ENST00000310190 EPHX1P07099 455 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 NDUFV2P19404 249 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 IL1R2P27930 398 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 GNA12Q03113 381 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 FNDC3BQ53EP0 1204 aaKnown RBP18.26■□□□□ 0.51
CCS-201ENST00000310190 ANO7Q6IWH7 933 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 POLNQ7Z5Q5 900 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 TMEM139Q8IV31 216 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 SLC35G2Q8TBE7 412 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 PRSS16Q9NQE7 514 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 FAM86C1Q9NVL1 165 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 USP36Q9P275 1121 aaKnown RBP18.26■□□□□ 0.51
CCS-201ENST00000310190 VPS28Q9UK41 221 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 SCML1Q9UN30 329 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 EPN1Q9Y6I3 576 aaPredicted RBP18.26■□□□□ 0.51
CCS-201ENST00000310190 ABCA7Q8IZY2 2146 aa18.26■□□□□ 0.51
CCS-201ENST00000310190 NYNRINQ9P2P1 1898 aaKnown RBP18.26■□□□□ 0.51
CCS-201ENST00000310190 A0A0D9SEW6 157 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 ZBTB24O43167 697 aaPredicted RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 RPP40O75818 363 aaKnown RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 EPHB2P29323 1055 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 NNMTP40261 264 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 CTSOP43234 321 aaPredicted RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 NDST2P52849 883 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 CA9Q16790 459 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 C9orf64Q5T6V5 341 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 VSIG1Q86XK7 387 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 PLPP6Q8IY26 295 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 SH2D3CQ8N5H7 860 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 ARHGEF2Q92974 986 aaKnown RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 PHOX2BQ99453 314 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 MKRN2Q9H000 416 aaKnown RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 RSPH9Q9H1X1 276 aaPredicted RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 NOL6Q9H6R4 1146 aaKnown RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
CCS-201ENST00000310190 ITM2CQ9NQX7 267 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 NDFIP2Q9NV92 336 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 VPS51Q9UID3 782 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 SLCO3A1Q9UIG8 710 aa18.25■□□□□ 0.51
CCS-201ENST00000310190 ZSCAN5CA6NGD5 496 aaPredicted RBP18.24■□□□□ 0.51
CCS-201ENST00000310190 BTNL10A8MVZ5 291 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 ZNF487B1APH4 448 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 ALOX15BO15296 676 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 NDUFA10O95299 355 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 WASP42768 502 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 ARSEP51690 589 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 DPYSQ14117 519 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 PARP15Q460N3 678 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 LRRC38Q5VT99 294 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 AFMIDQ63HM1 303 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 LAIR1Q6GTX8 287 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 TFAP2DQ7Z6R9 452 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 LZTR1Q8N653 840 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 TSC1Q92574 1164 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 PTPRN2Q92932 1015 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 FAM131CQ96AQ9 280 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
CCS-201ENST00000310190 KCTD15Q96SI1 283 aaPredicted RBP18.24■□□□□ 0.51
CCS-201ENST00000310190 CEP44Q9C0F1 390 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 KLC2Q9H0B6 622 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 MUC3BQ9H195 1237 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 PRDM16Q9HAZ2 1276 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 PCSK1NQ9UHG2 260 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 SLC25A13Q9UJS0 675 aa18.24■□□□□ 0.51
CCS-201ENST00000310190 SDK1Q7Z5N4 2213 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms