RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SNX32Q86XE0 403 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SENP8Q96LD8 212 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PARD6BQ9BYG5 372 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 GLIS2Q9BZE0 524 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FBRSQ9HAH7 460 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CRTAC1Q9NQ79 661 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 A1CFQ9NQ94 594 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PHPT1Q9NRX4 125 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PCDHA3Q9Y5H8 950 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CCDC85CA6NKD9 419 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SIGLEC16A6NMB1 481 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 NDUFB5O43674 189 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 VEGFDO43915 354 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 UBXN7O94888 489 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 KRT75O95678 551 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 LGALS2P05162 132 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 RPSAP08865 295 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SLC35G4P0C7Q5 338 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ERCC2P18074 760 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SOAT1P35610 550 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FLT3LGP49771 235 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SERPINH1P50454 418 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 MAP3K7CLP57077 242 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PTENP60484 403 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ERVK-21P61565 698 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 GTF2BQ00403 316 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 UBE3AQ05086 875 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ATP13A4Q4VNC1 1196 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CERCAMQ5T4B2 595 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 APOBEC3HQ6NTF7 200 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FBXO38Q6PIJ6 1188 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CCDC80Q76M96 950 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 TRPM8Q7Z2W7 1104 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 LUZP2Q86TE4 346 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 TMC8Q8IU68 726 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 C12orf56Q8IXR9 622 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 MPP5Q8N3R9 675 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ZSCAN1Q8NBB4 408 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 B4GALNT2Q8NHY0 566 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FAM172AQ8WUF8 416 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CXorf40BQ96DE9 158 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 DEPDC7Q96QD5 511 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 DPY30Q9C005 99 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 OPTCQ9UBM4 332 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SLC28A1O00337 649 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 KPNA3O00505 521 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CNOT3O75175 753 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 KRT34O76011 436 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PROSCO94903 275 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ABCB1P08183 1280 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ENDOUP21128 410 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 NOS3P29474 1203 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ICAM3P32942 547 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PTPN7P35236 360 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 IGFALSP35858 605 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 RFX5P48382 616 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 COPAP53621 1224 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 LONRF1Q17RB8 773 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 TRIM40Q6P9F5 258 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SLC13A5Q86YT5 568 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 NPAS4Q8IUM7 802 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FAM45AQ8TCE6 357 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 KLRG1Q96E93 195 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PNMA5Q96PV4 448 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 THUMPD3Q9BV44 507 aaKnown RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SEMA3GQ9NS98 782 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CATSPERZQ9NTU4 200 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 B4GALT4O60513 344 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 TLR5O60602 858 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FYNP06241 537 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FGFR1P11362 822 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SHMT1P34896 483 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CASRP41180 1078 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 GRM5P41594 1212 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 MAGEA4P43358 317 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ASMTP46597 345 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SESN3P58005 492 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ATP6V0D1P61421 351 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 LGALS3BPQ08380 585 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 STK4Q13043 487 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SEC23AQ15436 765 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PTPRNQ16849 979 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 TRIM68Q6AZZ1 485 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PPP4R4Q6NUP7 873 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CXCL17Q6UXB2 119 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF662Q6ZS27 426 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CHSY3Q70JA7 882 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 CHPFQ8IZ52 775 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SETD9Q8NE22 299 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 RDH11Q8TC12 318 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 FAM162AQ96A26 154 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 HAPLN3Q96S86 360 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PLEKHA4Q9H4M7 779 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PCDH18Q9HCL0 1135 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 USP15Q9Y4E8 981 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SHROOM3Q8TF72 1996 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 SPATA31C2B4DYI2 1134 aa3.24□□□□□ -1.89
CLOCK-201ENST00000309964 PRR23D1E9PI22 279 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms