RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 USP7Q93009 1102 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 BTBD7Q9P203 1132 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 DICER1Q9UPY3 1922 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CYP7B1O75881 506 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 AKAP3O75969 853 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CCL5P13501 91 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 FEN1P39748 380 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 RCN1Q15293 331 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 SPATA4Q8NEY3 305 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 UBA3Q8TBC4 463 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PARD6BQ9BYG5 372 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 A0A087WWV3 80 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 FOXN3O00409 490 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 SNRPAP09012 282 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 MAGEA10P43363 369 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CAPRIN2Q6IMN6 1127 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CENPLQ8N0S6 344 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 POLR1EQ9GZS1 481 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 DHX33Q9H6R0 707 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 IGKV6D-41A0A0C4DH26 115 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 TMEM114B3SHH9 223 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 AKAP5P24588 427 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 BNC1Q01954 994 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 BIKQ13323 160 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC39A12Q504Y0 691 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 FNDC3BQ53EP0 1204 aaKnown RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 FBXL19Q6PCT2 694 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PACS1Q6VY07 963 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 LRRC6Q86X45 466 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 RASAL3Q86YV0 1011 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC44A2Q8IWA5 706 aaPredicted RBP8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 TMEM161BQ8NDZ6 487 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 C1orf54Q8WWF1 131 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 CNDP1Q96KN2 507 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 RACGAP1Q9H0H5 632 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 TRPC4Q9UBN4 977 aa8.48□□□□□ -1.05
PCDHB1-201ENST00000306549 PDZK1P1A8MUH7 402 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ENO1P06733 434 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF211Q13398 564 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 KCTD13Q8WZ19 329 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 WNT8BQ93098 351 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SGSM3Q96HU1 749 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SIKE1Q9BRV8 207 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RNPEPQ9H4A4 650 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 COPG2Q9UBF2 871 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SIK3Q9Y2K2 1263 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 NEU2Q9Y3R4 380 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 USP1O94782 785 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 HIST1H2ABP04908 130 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PDHA1P08559 390 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 FLT3P36888 993 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 BCL2L1Q07817 233 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SMAD1Q15797 465 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 LRRC38Q5VT99 294 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 HIST3H2AQ7L7L0 130 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 OTOAQ7RTW8 1153 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC22A9Q8IVM8 553 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 HIST1H2ACQ93077 130 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RNFT2Q96EX2 444 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 UBA2Q9UBT2 640 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PPIEQ9UNP9 301 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 STARD13Q9Y3M8 1113 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SIGLEC16A6NMB1 481 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC10A3P09131 477 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF7P17097 686 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 CD52P31358 61 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC20A2Q08357 652 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 OTOP3Q7RTS5 596 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 LRRC39Q96DD0 335 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 CLCC1Q96S66 551 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PI4K2AQ9BTU6 479 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 TBCDQ9BTW9 1192 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SERHL2Q9H4I8 314 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 FANCEQ9HB96 536 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SERHLQ9NQF3 203 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RCOR3Q9P2K3 495 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ANKRD31Q8N7Z5 1873 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 APODP05090 189 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SARSP49591 514 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 KDSRQ06136 332 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 BTKQ06187 659 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SETMARQ53H47 684 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ARMCX4Q5H9R4 360 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 TAS1R2Q8TE23 839 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 BHMTQ93088 406 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 CRELD1Q96HD1 420 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 UNC93B1Q9H1C4 597 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RETREG1Q9H6L5 497 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 INTS7Q9NVH2 962 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PROSCO94903 275 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 TYMPP19971 482 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 GRK2P25098 689 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ANKMY2Q8IV38 441 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 TMEM159Q96B96 161 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ASB2Q96Q27 587 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 OSBPL1AQ9BXW6 950 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms