RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 MRPS15P82914 257 aaKnown RBP16.21■□□□□ 0.19
USP42-201ENST00000306177 IKBKEQ14164 716 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 KRT78Q8N1N4 520 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 PRELID2Q8N945 189 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 SPG21Q9NZD8 308 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 A0A0B4J269 797 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 PTPN3P26045 913 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 RPL22P35268 128 aaKnown RBP16.21■□□□□ 0.18
USP42-201ENST00000306177 VAC14Q08AM6 782 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 TRAF2Q12933 501 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 ATP13A4Q4VNC1 1196 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 MFSD4BQ5TF39 518 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 USP6NLQ92738 828 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 ACTL7BQ9Y614 415 aa16.21■□□□□ 0.18
USP42-201ENST00000306177 B4GALT5O43286 388 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 ATP4AP20648 1035 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 FASP25445 335 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 RPA3P35244 121 aaPredicted RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 GRM5P41594 1212 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 CRYBB1P53674 252 aaPredicted RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 NSMCE2Q96MF7 247 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 SAR1AQ9NR31 198 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 MRPL42Q9Y6G3 142 aaKnown RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 ADCY6O43306 1168 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 DYRK3O43781 588 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 GJB1P08034 283 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 ABHD2P08910 425 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 SERPINA4P29622 427 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 PIK3CGP48736 1102 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 PSEN1P49768 467 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 DRG2P55039 364 aaKnown RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 PWP1Q13610 501 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 BBS12Q6ZW61 710 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 MREGQ8N565 214 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 MYLK2Q9H1R3 596 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 KRT84Q9NSB2 600 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 KCNK4Q9NYG8 393 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 MRASO14807 208 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 TKTP29401 623 aaKnown RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 FAM98BQ52LJ0 330 aaKnown RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 TTMPQ5BVD1 217 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 EEF1DP3Q658K8 133 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 DSG4Q86SJ6 1040 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 ART4Q93070 314 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 CENPTQ96BT3 561 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 NFKBIZQ9BYH8 718 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 TMEM245Q9H330 911 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 SF3B1O75533 1304 aaKnown RBP eCLIP16.2■□□□□ 0.183e-6■■■■■ 85.1
USP42-201ENST00000306177 hCG_1818297A0A087WSY0 165 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 ZCCHC18P0CG32 403 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 DARSP14868 501 aaKnown RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 MARCKSL1P49006 195 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 DHFR2Q86XF0 187 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 LRRC52Q8N7C0 313 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 MMADHCQ9H3L0 296 aaPredicted RBP16.2■□□□□ 0.18
USP42-201ENST00000306177 USE1Q9NZ43 259 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 CRYL1Q9Y2S2 319 aa16.2■□□□□ 0.18
USP42-201ENST00000306177 CCDC154A6NI56 674 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 PHGDHO43175 533 aaKnown RBP16.19■□□□□ 0.18
USP42-201ENST00000306177 ZNF862O60290 1169 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 SEC22BO75396 215 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 SGCGQ13326 291 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ACOX1Q15067 660 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 C10orf53Q8N6V4 93 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 SEMA4DQ92854 862 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 TSPAN18Q96SJ8 248 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 C2orf49Q9BVC5 232 aaPredicted RBP16.19■□□□□ 0.18
USP42-201ENST00000306177 ZNF112Q9UJU3 913 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 CENPAP49450 140 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 PREPLQ4J6C6 727 aaPredicted RBP16.19■□□□□ 0.18
USP42-201ENST00000306177 OLFML2BQ68BL8 750 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 MTSS1LQ765P7 747 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 RNF208Q9H0X6 261 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 PIF1Q9H611 641 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 SH3BP4Q9P0V3 963 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 PTCH2Q9Y6C5 1203 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 MEI4A8MW99 385 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ZBTB22O15209 634 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 RANBP1P43487 201 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 RPL14P50914 215 aaKnown RBP16.19■□□□□ 0.18
USP42-201ENST00000306177 HECTD3Q5T447 861 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ZNF438Q7Z4V0 828 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 LRRC49Q8IUZ0 686 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ZNF614Q8N883 585 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 OSCP1Q8WVF1 389 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 MYLPFQ96A32 169 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 REPS1Q96D71 796 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 DNMT3LQ9UJW3 386 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 RIPK3Q9Y572 518 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 H3BMM5 538 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 CCNE2O96020 404 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ERBB2P04626 1255 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 PPP2R1BP30154 601 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 IRX1P78414 480 aaPredicted RBP16.19■□□□□ 0.18
USP42-201ENST00000306177 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 USP45Q70EL2 814 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms