RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 INTS6Q9UL03 887 aaKnown RBP27.8■■■□□ 2.04
HDAC3-201ENST00000305264 OR51B4Q9Y5P0 310 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 URI1O94763 535 aaPredicted RBP27.8■■■□□ 2.04
HDAC3-201ENST00000305264 PABPC1P11940 636 aaKnown RBP27.8■■■□□ 2.04
HDAC3-201ENST00000305264 PARP15Q460N3 678 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 FUT11Q495W5 492 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 GRAMD4Q6IC98 578 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 APCDD1Q8J025 514 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 ACTL9Q8TC94 416 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 LRRN4Q8WUT4 740 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 P3H4Q92791 437 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 ARHGEF2Q92974 986 aaKnown RBP27.8■■■□□ 2.04
HDAC3-201ENST00000305264 MAGEH1Q9H213 219 aa27.8■■■□□ 2.04
HDAC3-201ENST00000305264 SHROOM3Q8TF72 1996 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 EIF2DP41214 584 aaKnown RBP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 OTUD4Q01804 1114 aaKnown RBP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 GEN1Q17RS7 908 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 ZNF783Q6ZMS7 281 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 ARHGAP36Q6ZRI8 547 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 OLFM3Q96PB7 478 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 MUTYHQ9UIF7 546 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 SLC27A6Q9Y2P4 619 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 A0A0C4DFX4 3053 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 PAPOLAP51003 745 aaKnown RBP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 YBEYP58557 167 aaPredicted RBP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 GALNT2Q10471 571 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 PLEKHG6Q3KR16 790 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 SFTPA1Q8IWL2 248 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 C8orf33Q9H7E9 229 aaPredicted RBP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 FBRSL1Q9HCM7 1045 aaKnown RBP27.79■■■□□ 2.04
HDAC3-201ENST00000305264 VPS28Q9UK41 221 aa27.79■■■□□ 2.04
HDAC3-201ENST00000305264 MUC3AQ02505 3323 aa27.78■■■□□ 2.04
HDAC3-201ENST00000305264 PDE2AO00408 941 aaPredicted RBP27.78■■■□□ 2.04
HDAC3-201ENST00000305264 SLC44A4Q53GD3 710 aa27.78■■■□□ 2.04
HDAC3-201ENST00000305264 PITRM1Q5JRX3 1037 aa27.78■■■□□ 2.04
HDAC3-201ENST00000305264 KIAA0907Q7Z7F0 614 aaPredicted RBP27.78■■■□□ 2.04
HDAC3-201ENST00000305264 RALGPS2Q86X27 583 aaPredicted RBP27.78■■■□□ 2.04
HDAC3-201ENST00000305264 ATG4AQ8WYN0 398 aa27.78■■■□□ 2.04
HDAC3-201ENST00000305264 SPON2Q9BUD6 331 aa27.78■■■□□ 2.04
HDAC3-201ENST00000305264 ATP13A1Q9HD20 1204 aa27.78■■■□□ 2.04
HDAC3-201ENST00000305264 GLDCP23378 1020 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 NR2C2P49116 596 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 OXCT1P55809 520 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 NOMO1Q15155 1222 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 TMEM215Q68D42 235 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 IL31Q6EBC2 164 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 ZNF354CQ86Y25 554 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 PNKPQ96T60 521 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 SHISA7A6NL88 538 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.77■■■□□ 2.04
HDAC3-201ENST00000305264 SERINC3Q13530 473 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 SLC12A1Q13621 1099 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 B4GALNT4Q76KP1 1039 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 ADIPOR2Q86V24 386 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 TERB1Q8NA31 727 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 P2RY13Q9BPV8 354 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 AP1M1Q9BXS5 423 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 ACE2Q9BYF1 805 aaPredicted RBP27.77■■■□□ 2.04
HDAC3-201ENST00000305264 CA14Q9ULX7 337 aa27.77■■■□□ 2.04
HDAC3-201ENST00000305264 ARHGAP42A6NI28 874 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 SNAP91O60641 907 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 GARSP41250 739 aaKnown RBP27.76■■■□□ 2.03
HDAC3-201ENST00000305264 GALK1P51570 392 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 TPRG1Q6ZUI0 275 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 AHI1Q8N157 1196 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 ATPAF2Q8N5M1 289 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 NAP1L3Q99457 506 aaPredicted RBP27.76■■■□□ 2.03
HDAC3-201ENST00000305264 LGMNQ99538 433 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 CDC23Q9UJX2 597 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 NCOR1O75376 2440 aa27.76■■■□□ 2.03
HDAC3-201ENST00000305264 ETFBP38117 255 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 PLK1P53350 603 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 ZC3H18Q86VM9 953 aaKnown RBP27.75■■■□□ 2.03
HDAC3-201ENST00000305264 DCAF4L2Q8NA75 395 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 C1orf54Q8WWF1 131 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 RAD54BQ9Y620 910 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 PRRT4C9JH25 899 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 CBX4O00257 560 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 KAT7O95251 611 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 PON2Q15165 354 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 MLF2Q15773 248 aaPredicted RBP27.75■■■□□ 2.03
HDAC3-201ENST00000305264 TTC13Q8NBP0 860 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 MAIP1Q8WWC4 291 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 VPS51Q9UID3 782 aa27.75■■■□□ 2.03
HDAC3-201ENST00000305264 GLULP15104 373 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 MX2P20592 715 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 PDK1Q15118 436 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 DNTTIP2Q5QJE6 756 aaKnown RBP27.74■■■□□ 2.03
HDAC3-201ENST00000305264 MBLAC2Q68D91 279 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 PRELID2Q8N945 189 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 ARHGEF3Q9NR81 526 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 MRFAP1Q9Y605 127 aa27.74■■■□□ 2.03
HDAC3-201ENST00000305264 J3KR12 359 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 MAFKO60675 156 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 CTSOP43234 321 aaPredicted RBP27.73■■■□□ 2.03
HDAC3-201ENST00000305264 EIF3EP60228 445 aaKnown RBP27.73■■■□□ 2.03
HDAC3-201ENST00000305264 BZW1Q7L1Q6 419 aaKnown RBP27.73■■■□□ 2.03
HDAC3-201ENST00000305264 UBALD2Q8IYN6 164 aa27.73■■■□□ 2.03
HDAC3-201ENST00000305264 WFIKKN2Q8TEU8 576 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms