RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SERPINA6P08185 405 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 FGF3P11487 239 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-202ENST00000299543 CYP2C9P11712 490 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 FDFT1P37268 417 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 PTPN9P43378 593 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 CD151P48509 253 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 PLD6Q8N2A8 252 aaKnown RBP13.74□□□□□ -0.21
CTDP1-202ENST00000299543 DCLK2Q8N568 766 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 EDEM1Q92611 657 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 RNF34Q969K3 372 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 MFSD3Q96ES6 412 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 SOX13Q9UN79 622 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 RPL26L1Q9UNX3 145 aaKnown RBP13.74□□□□□ -0.21
CTDP1-202ENST00000299543 NUP205Q92621 2012 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 ADCY6O43306 1168 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 CPA3P15088 417 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 AVPR1AP37288 418 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 MATKP42679 507 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 DNAL1Q4LDG9 190 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 MARCH8Q5T0T0 291 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 CERCAMQ5T4B2 595 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 KYAT3Q6YP21 454 aaKnown RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 FASTKD5Q7L8L6 764 aaKnown RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF554Q86TJ5 538 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 CELF6Q96J87 481 aaKnown RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 SNX27Q96L92 541 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 CCDC106Q9BWC9 280 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 ADARB2Q9NS39 739 aaKnown RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 SIN3BO75182 1162 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 SNNO75324 88 aaPredicted RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 DGKIO75912 1065 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 MSX2P35548 267 aaPredicted RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 RXRGP48443 463 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 COPAP53621 1224 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 WASHC5Q12768 1159 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 PDK1Q15118 436 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 MBLAC2Q68D91 279 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 NXNQ6DKJ4 435 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 RAVER1Q8IY67 606 aaKnown RBP13.73□□□□□ -0.21
CTDP1-202ENST00000299543 DEFB107AQ8IZN7 70 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 ARNTL2Q8WYA1 636 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 SCYL1Q96KG9 808 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 GRIP2Q9C0E4 1043 aa13.73□□□□□ -0.21
CTDP1-202ENST00000299543 LSM1O15116 133 aaKnown RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 VILLO15195 856 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SERPINE1P05121 402 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SMPD1P17405 629 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 PGAM1P18669 254 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 GARSP41250 739 aaKnown RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 AQP4P55087 323 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 IRF9Q00978 393 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SOX4Q06945 474 aaPredicted RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ASPHQ12797 758 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 MED21Q13503 144 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 GK3PQ14409 553 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 PCLAFQ15004 111 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 DCAF4L1Q3SXM0 396 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ATG14Q6ZNE5 492 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 NANOGNBQ7Z5D8 188 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 CERS2Q96G23 380 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 FCRL3Q96P31 734 aaPredicted RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SNX15Q9NRS6 342 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 DCDC2Q9UHG0 476 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SLC39A10Q9ULF5 831 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 FZD10Q9ULW2 581 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 FIS1Q9Y3D6 152 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 AIM2O14862 343 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 BIRC5O15392 142 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 CFLARO15519 480 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 NCAM1P13591 858 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ERCC2P18074 760 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SERPINB5P36952 375 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 MAGEA3P43357 314 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 NUMBP49757 651 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 TKTL1P51854 596 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 EMP3P54852 163 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 WSCD1Q658N2 575 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 PHTF2Q8N3S3 785 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 C20orf96Q9NUD7 363 aaPredicted RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 UBAP1Q9NZ09 502 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms