RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TAF6P49848 677 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 RPS6KA3P51812 740 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 TNK2Q07912 1038 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 USP4Q13107 963 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 STARD3Q14849 445 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SEPT12Q8IYM1 358 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PGBD3Q8N328 593 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MSL3Q8N5Y2 521 aaKnown RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 RXFP2Q8WXD0 754 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MYDGFQ969H8 173 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ABI2Q9NYB9 513 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PHF11Q9UIL8 331 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF221Q9UK13 617 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 IKZF3Q9UKT9 509 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SLC12A4Q9UP95 1085 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ANKRD6Q9Y2G4 727 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 NOTOA8MTQ0 251 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MAGEB2O15479 319 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 NDUFB5O43674 189 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 TSPAN3O60637 253 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 VDRP11473 427 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 LPIN1Q14693 890 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SLCO6A1Q86UG4 719 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 POMGNT2Q8NAT1 580 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 OR56A4Q8NGH8 313 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 OTUD5Q96G74 571 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PRMT7Q9NVM4 692 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 LIN7AO14910 233 aaPredicted RBP15.09■□□□□ 0.01
SCN3B-201ENST00000299333 SNAP91O60641 907 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 VPS4BO75351 444 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 CDK7P50613 346 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 C6orf183Q5T699 404 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 KYAT3Q6YP21 454 aaKnown RBP15.09■□□□□ 0.01
SCN3B-201ENST00000299333 POLNQ7Z5Q5 900 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 H3BMM5 538 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 ECDO95905 644 aaPredicted RBP15.09■□□□□ 0.01
SCN3B-201ENST00000299333 MILR1Q7Z6M3 343 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 APBA2Q99767 749 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 GPRC5CQ9NQ84 441 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 EPN2O95208 641 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 KCNH1O95259 989 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 DRD4P21917 467 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 CDC42EP1Q00587 391 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 EML3Q32P44 896 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 ILDR2Q71H61 639 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 PAGE2Q7Z2X7 111 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 MIB1Q86YT6 1006 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 RIT2Q99578 217 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 FKBP14Q9NWM8 211 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 PTGFRNQ9P2B2 879 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 PLA2G4CQ9UP65 541 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 TPP1O14773 563 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 MED24O75448 989 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 SLC2A3P11169 496 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 MPP2Q14168 576 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 SPANXN3Q5MJ09 141 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 OFCC1Q8IZS5 231 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 REXO5Q96IC2 774 aaKnown RBP15.09■□□□□ 0.01
SCN3B-201ENST00000299333 OSBPL11Q9BXB4 747 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF518BQ9C0D4 1074 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 MAN1C1Q9NR34 630 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 KCNH7Q9NS40 1196 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 MCUBQ9NWR8 336 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 DNPEPQ9ULA0 475 aa15.09■□□□□ 0.01
SCN3B-201ENST00000299333 LOC110117498-PIK3R3F6TDL0 507 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 KPNA5O15131 536 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 S100A3P33764 101 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 POLD2P49005 469 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF470Q6ECI4 717 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 PIWIL2Q8TC59 973 aaKnown RBP15.08■□□□□ 0.01
SCN3B-201ENST00000299333 SLITRK1Q96PX8 696 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 CLN6Q9NWW5 311 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 GGA2Q9UJY4 613 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 UNC13BO14795 1591 aa15.08■□□□□ 0.01
SCN3B-201ENST00000299333 SCNN1BP51168 640 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 PSME3P61289 254 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.08■□□□□ 0
SCN3B-201ENST00000299333 TTC29Q8NA56 475 aaPredicted RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 TAS1R2Q8TE23 839 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 COX4I2Q96KJ9 171 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 GGA3Q9NZ52 723 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 EFR3BQ9Y2G0 817 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 CLTCL1P53675 1640 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 FAM25EA8MYX2 175 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 F5H5T6 163 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 SCGNO76038 276 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 RRP1BQ14684 758 aaKnown RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 SHQ1Q6PI26 577 aaKnown RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 IL27RAQ6UWB1 636 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 CCDC36Q8IYA8 594 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 MTFMTQ96DP5 389 aaKnown RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 C3orf18Q9UK00 162 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 SH3BGRLO75368 114 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 AKAP3O75969 853 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 FARP2O94887 1054 aaPredicted RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 ADSLP30566 484 aaPredicted RBP15.08■□□□□ 0
SCN3B-201ENST00000299333 IFNGR2P38484 337 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 CDH17Q12864 832 aa15.08■□□□□ 0
SCN3B-201ENST00000299333 VPS72Q15906 364 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms