RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 ARHGAP12Q8IWW6 846 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 CARNMT1Q8N4J0 409 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 LZTR1Q8N653 840 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 LRRC19Q9H756 370 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 MARK1Q9P0L2 795 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 TBC1D30Q9Y2I9 924 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 KIF26AQ9ULI4 1882 aaPredicted RBP18.23■□□□□ 0.51
CCDC78-201ENST00000293889 MYOFQ9NZM1 2061 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 NEDD8-MDP1E9PL57 170 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 GDI1P31150 447 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 NDST2P52849 883 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 TNK2Q07912 1038 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 CYP1B1Q16678 543 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 CXorf57Q6NSI4 855 aaKnown RBP18.23■□□□□ 0.51
CCDC78-201ENST00000293889 OR52K2Q8NGK3 314 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 SLC35B2Q8TB61 432 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 MAGOHBQ96A72 148 aaKnown RBP18.23■□□□□ 0.51
CCDC78-201ENST00000293889 OLFM3Q96PB7 478 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 TRMT61BQ9BVS5 477 aaKnown RBP18.23■□□□□ 0.51
CCDC78-201ENST00000293889 SLC39A8Q9C0K1 460 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 HPS4Q9NQG7 708 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 HOMER3Q9NSC5 361 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 CLEC4EQ9ULY5 219 aa18.23■□□□□ 0.51
CCDC78-201ENST00000293889 TRIOO75962 3097 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 NUP205Q92621 2012 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 OTOL1A6NHN0 477 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 H0Y626 953 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 LIASO43766 372 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 NFATC1O95644 943 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 ADH1CP00326 375 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 TYRP14679 529 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 EIF3EP60228 445 aaKnown RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 FSCBQ5H9T9 825 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 C6orf118Q5T5N4 469 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 CCNI2Q6ZMN8 369 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 B4GALNT4Q76KP1 1039 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 SETD3Q86TU7 594 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 ZC3H18Q86VM9 953 aaKnown RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 MFN1Q8IWA4 741 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 C12orf50Q8NA57 414 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 WFDC5Q8TCV5 224 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 LRRN4Q8WUT4 740 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 FRMD8P1Q9BZ68 369 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-201ENST00000293889 DNPEPQ9ULA0 475 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 RAD54BQ9Y620 910 aa18.22■□□□□ 0.51
CCDC78-201ENST00000293889 CCDC188H7C350 402 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 DFFAO00273 331 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 MCF2LO15068 1137 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 CHADO15335 359 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 RAMP2O60895 175 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 PHF2O75151 1096 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 RHOCP08134 193 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 ADH5P11766 374 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 TNFRSF8P28908 595 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 GALNT2Q10471 571 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 POLD3Q15054 466 aaPredicted RBP18.21■□□□□ 0.51
CCDC78-201ENST00000293889 TTC27Q6P3X3 843 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 BZW1Q7L1Q6 419 aaKnown RBP18.21■□□□□ 0.51
CCDC78-201ENST00000293889 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 HMCESQ96FZ2 354 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 DDX47Q9H0S4 455 aaKnown RBP18.21■□□□□ 0.51
CCDC78-201ENST00000293889 C10orf88Q9H8K7 445 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 ECT2Q9H8V3 914 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 IGSF9Q9P2J2 1179 aa18.21■□□□□ 0.51
CCDC78-201ENST00000293889 A0A0D9SEW6 157 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 RASA4BC9J798 803 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 RASA4O43374 803 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 RBP3P10745 1247 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 KCNJ1P48048 391 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 GNA12Q03113 381 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 GAD2Q05329 585 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 CDH18Q13634 790 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 BYSLQ13895 437 aaKnown RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 PDK1Q15118 436 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 OASLQ15646 514 aaKnown RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 DRICH1Q6PGQ1 229 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 FIBINQ8TAL6 211 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 NKD2Q969F2 451 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 LGMNQ99538 433 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ILVBLA1L0T0 632 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 H7C0C1 242 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ARNTLO00327 626 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 HOXC11O43248 304 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 MX2P20592 715 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ACVRL1P37023 503 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 COILP38432 576 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 GARSP41250 739 aaKnown RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ATP5OP48047 213 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 YBEYP58557 167 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 XRCC4Q13426 336 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 RUNX3Q13761 415 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 PARP15Q460N3 678 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 RNF219Q5W0B1 726 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 CCDC70Q6NSX1 233 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 CCDC117Q8IWD4 279 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms