RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ACADMP11310 421 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 STARP49675 285 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 WDR49Q8IV35 697 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 BBS4Q96RK4 519 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 ALG9Q9H6U8 611 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 SMPD4Q9NXE4 827 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 PSMD12O00232 456 aaPredicted RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 DYRK3O43781 588 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 FGRP09769 529 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 TUBP50607 506 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 CEBPGP53567 150 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 MTTPP55157 894 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 PRMT9Q6P2P2 845 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 RASSF6Q6ZTQ3 369 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 HIPK1Q86Z02 1210 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 SYT12Q8IV01 421 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 ZC3H7AQ8IWR0 971 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 CHST7Q9NS84 486 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 OR1E1P30953 314 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 PRKAG1P54619 331 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 ALYREFQ86V81 257 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 DAGLBQ8NCG7 672 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 MRPL48Q96GC5 212 aaKnown RBP16.39■□□□□ 0.21
SSRP1-202ENST00000293880 NDNQ99608 321 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 PXMP2Q9NR77 195 aa16.39■□□□□ 0.21
SSRP1-202ENST00000293880 BIRC5O15392 142 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 DBTP11182 482 aaKnown RBP16.38■□□□□ 0.21
SSRP1-202ENST00000293880 CHN2P52757 468 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 CCNJLQ8IV13 435 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 AGAP11Q8TF27 550 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 KLHL32Q96NJ5 620 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 RHOBTB2Q9BYZ6 727 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 PRRG3Q9BZD7 231 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 RPRD1BQ9NQG5 326 aaKnown RBP16.38■□□□□ 0.21
SSRP1-202ENST00000293880 TRMT13Q9NUP7 481 aaKnown RBP16.38■□□□□ 0.21
SSRP1-202ENST00000293880 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 OR6A2O95222 327 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 PPP2R1BP30154 601 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 HUNKP57058 714 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 LPIN1Q14693 890 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 SCIMPQ6UWF3 145 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 HTR3CQ8WXA8 447 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 PWWP2AQ96N64 755 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 CNPY3Q9BT09 278 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 TPRKBQ9Y3C4 175 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 SPATA31A7Q8IWB4 1347 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 GRIA3P42263 894 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 B3GNT6Q6ZMB0 384 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 DHRSXQ8N5I4 330 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 CAMKK1Q8N5S9 505 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 FAM81AQ8TBF8 368 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 STN1Q9H668 368 aaKnown RBP16.38■□□□□ 0.21
SSRP1-202ENST00000293880 CLIC5Q9NZA1 410 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 BTBD3Q9Y2F9 522 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 MRPS7Q9Y2R9 242 aaKnown RBP16.38■□□□□ 0.21
SSRP1-202ENST00000293880 USP17L7P0C7H9 530 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 PRKAA1Q13131 559 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 XRCC4Q13426 336 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 NETO2Q8NC67 525 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 CHST13Q8NET6 341 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 UGT2B28Q9BY64 529 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 WDR41Q9HAD4 459 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 PCDH9Q9HC56 1237 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 SHOC2Q9UQ13 582 aa16.38■□□□□ 0.21
SSRP1-202ENST00000293880 TMEM114B3SHH9 223 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 TISP43B9A030 160 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 IFRD1O00458 451 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 NFKB1P19838 968 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ARF3P61204 181 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ARF1P84077 181 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 RBM44Q6ZP01 1051 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 REXO5Q96IC2 774 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 PCDH12Q9NPG4 1184 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 SNCAIPQ9Y6H5 919 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 KRT36O76013 467 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 PTPN11Q06124 597 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 RAPSNQ13702 412 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 TMC7Q7Z402 723 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 METTL6Q8TCB7 284 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ATXN2LQ8WWM7 1075 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 EMID1Q96A84 441 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ZNF184Q99676 751 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 GPR182O15218 404 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 PABPC1P11940 636 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 MUTP22033 750 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ITPK1Q13572 414 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ZNF720Q7Z2F6 126 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 C8orf59Q8N0T1 100 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 AENQ8WTP8 325 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 EMILIN2Q9BXX0 1053 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 FBXO6Q9NRD1 293 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms