RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CNTN5O94779 1100 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 TOP3BO95985 862 aaKnown RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 CYP1A1P04798 512 aaPredicted RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 IGHV4-34P06331 123 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 TPM3P06753 285 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 VAV1P15498 845 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 CHRNB2P17787 502 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 C5AR1P21730 350 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 CD27P26842 260 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 SOX5P35711 763 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 ZNF165P49910 485 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 AFF3P51826 1226 aaKnown RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 GALCP54803 685 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 JAM2P57087 298 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 FAM193AP78312 1265 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 SIM1P81133 766 aaPredicted RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 FMO1Q01740 532 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 CDR2Q01850 454 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 MYL5Q02045 173 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 HLA-BQ31612 363 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 ALFQ53S48 1182 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 KIAA0895LQ68EN5 471 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 IL27RAQ6UWB1 636 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 SND1Q7KZF4 910 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNF8-201ENST00000290330 ARCQ7LC44 396 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 BNIPLQ7Z465 357 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 ZNF683Q8IZ20 524 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 AADATQ8N5Z0 425 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 MSANTD4Q8NCY6 345 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 C1orf74Q96LT6 269 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 CFAP57Q96MR6 1250 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 CAMK1GQ96NX5 476 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 OMDQ99983 421 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 BPIFA3Q9BQP9 254 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 GAREM1Q9H706 876 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 IL21RQ9HBE5 538 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 TM9SF3Q9HD45 589 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 TMPRSS4Q9NRS4 437 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 TMEM51Q9NW97 253 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 LIMA1Q9UHB6 759 aaKnown RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 ADAMTS1Q9UHI8 967 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 VPS28Q9UK41 221 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 FZD4Q9ULV1 537 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 PAXBP1Q9Y5B6 917 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 SNX10Q9Y5X0 201 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 A0A1W2PPC4 97 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 FAM47DPA6NHR8 397 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 LRRC10BA6NIK2 292 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 DRGXA6NNA5 263 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 GOLGA6L6A8MZA4 724 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 C10orf142B7Z368 130 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ATP9BO43861 1147 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 CER1O95813 267 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 IL1BP01584 269 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ZNF883P0CG24 379 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ZNF18P17022 549 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 GOT1P17174 413 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 SPINK2P20155 84 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 MMP8P22894 467 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 STAT1P42224 750 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 GRIA4P48058 902 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 PSMD8P48556 350 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 HNRNPDQ14103 355 aaKnown RBP10.75□□□□□ -0.69
SNF8-201ENST00000290330 NCAPHQ15003 741 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 SYCP1Q15431 976 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 KIF19Q2TAC6 998 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ARTNQ5T4W7 220 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ACBD5Q5T8D3 534 aaPredicted RBP10.75□□□□□ -0.69
SNF8-201ENST00000290330 NCEH1Q6PIU2 408 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 LRRC31Q6UY01 552 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ANKRD20A12PQ8NF67 263 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 SPAG5Q96R06 1193 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 SCNM1Q9BWG6 230 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 HSD3B7Q9H2F3 369 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 TM7SF3Q9NS93 570 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 MPP6Q9NZW5 540 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 SLC25A13Q9UJS0 675 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 ANKRD6Q9Y2G4 727 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 FNDC3AQ9Y2H6 1198 aaKnown RBP10.75□□□□□ -0.69
SNF8-201ENST00000290330 DAAM1Q9Y4D1 1078 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 CACNA1EQ15878 2313 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 PCNX2A6NKB5 2137 aa10.75□□□□□ -0.69
SNF8-201ENST00000290330 IGLV3-10A0A075B6K4 115 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 SMTNL1A8MU46 457 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 LGALS16A8MUM7 142 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 E9PAM4 449 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 CBFA2T3O75081 653 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 ENDOD1O94919 500 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 ADH1BP00325 375 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 RHOCP08134 193 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 UNGP13051 313 aaPredicted RBP10.74□□□□□ -0.69
SNF8-201ENST00000290330 RDXP35241 583 aaKnown RBP10.74□□□□□ -0.69
SNF8-201ENST00000290330 DRD3P35462 400 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 METAP1P53582 386 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 ATP11AP98196 1134 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 TEAD4Q15561 434 aa10.74□□□□□ -0.69
SNF8-201ENST00000290330 TRIP6Q15654 476 aaKnown RBP10.74□□□□□ -0.69
SNF8-201ENST00000290330 DLG2Q15700 870 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms