RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 DFFAO00273 331 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 LIASO43766 372 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 TULP3O75386 442 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 CSKP41240 450 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 GARSP41250 739 aaKnown RBP22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 SOX9P48436 509 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 YBEYP58557 167 aaPredicted RBP22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 SNX1Q13596 522 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 CCNG2Q16589 344 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 CYP1B1Q16678 543 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 ITPRIPL2Q3MIP1 535 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 TTC27Q6P3X3 843 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 TTC13Q8NBP0 860 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 MAGEH1Q9H213 219 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 F5P12259 2224 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 SHROOM3Q8TF72 1996 aa22.33■■□□□ 1.17
PDLIM3-203ENST00000284771 C19orf67A6NJJ6 358 aa22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 GLDCP23378 1020 aa22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 OPRD1P41143 372 aa22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 KCNJ1P48048 391 aa22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 OASLQ15646 514 aaKnown RBP22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 ATXN2LQ8WWM7 1075 aaKnown RBP22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 TRPV5Q9NQA5 729 aa22.33■■□□□ 1.16
PDLIM3-203ENST00000284771 MAFKO60675 156 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 RBP3P10745 1247 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 EIF3EP60228 445 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 NR1H3Q13133 447 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 SERINC3Q13530 473 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 TDGQ13569 410 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 PARP15Q460N3 678 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 TMEM215Q68D42 235 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 KIAA0907Q7Z7F0 614 aaPredicted RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 C12orf50Q8NA57 414 aaPredicted RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 LRRN4CLQ8ND94 238 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 ASB2Q96Q27 587 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 CARD6Q9BX69 1037 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 ACE2Q9BYF1 805 aaPredicted RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 SLC2A11Q9BYW1 496 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 DDX47Q9H0S4 455 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 DNAJC17Q9NVM6 304 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 KIAA1522Q9P206 1035 aaPredicted RBP22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 RAD54BQ9Y620 910 aa22.32■■□□□ 1.16
PDLIM3-203ENST00000284771 J3KR12 359 aa22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 BYSLQ13895 437 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 ZNF783Q6ZMS7 281 aa22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 PHTF2Q8N3S3 785 aa22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 NKD2Q969F2 451 aaPredicted RBP22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 MAGOHBQ96A72 148 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 HDAC11Q96DB2 347 aa22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 XPO6Q96QU8 1125 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 MUC3BQ9H195 1237 aa22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 FBRSL1Q9HCM7 1045 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-203ENST00000284771 NCAM2O15394 837 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 DGKGP49619 791 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PLK1P53350 603 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PPIDQ08752 370 aaKnown RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 C2orf54Q08AI8 447 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 XRCC4Q13426 336 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PDK1Q15118 436 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 GEN1Q17RS7 908 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PLEKHG6Q3KR16 790 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 DRICH1Q6PGQ1 229 aaPredicted RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 BZW1Q7L1Q6 419 aaKnown RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 ADIPOR2Q86V24 386 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 TMEM121Q9BTD3 319 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 SPON2Q9BUD6 331 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 USP29Q9HBJ7 922 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 HEBP1Q9NRV9 189 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 IPO11Q9UI26 975 aaKnown RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 GGA2Q9UJY4 613 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 ACTL7AQ9Y615 435 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 KIAA1549LQ6ZVL6 1849 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 ARHGAP42A6NI28 874 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 MCF2LO15068 1137 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 SNAP91O60641 907 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PHF2O75151 1096 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 ZMPSTE24O75844 475 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PEX11BO96011 259 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 VAV1P15498 845 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 NRLP54845 237 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 CKAP4Q07065 602 aaKnown RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 PRKD1Q15139 912 aaPredicted RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 FUT11Q495W5 492 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 IL31Q6EBC2 164 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 CCDC117Q8IWD4 279 aaPredicted RBP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 SFTPA1Q8IWL2 248 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 CCNYQ8ND76 341 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 CSGALNACT1Q8TDX6 532 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 TSGA13Q96PP4 275 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 ATP13A1Q9HD20 1204 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 VPS28Q9UK41 221 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 SLC27A6Q9Y2P4 619 aa22.3■■□□□ 1.16
PDLIM3-203ENST00000284771 MUC3AQ02505 3323 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 SHISA7A6NL88 538 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 H7C0C1 242 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 CD160O95971 181 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 PABPC1P11940 636 aaKnown RBP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 MX2P20592 715 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 RBL1P28749 1068 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms