RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 POLD3Q15054 466 aaPredicted RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 FYB2Q5VWT5 728 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 RNF43Q68DV7 783 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 TMEM25Q86YD3 366 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 FAM71DQ8N9W8 422 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 BHMTQ93088 406 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 TSGA13Q96PP4 275 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 XIRP2A4UGR9 3374 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 ILVBLA1L0T0 632 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 GRXCR2A6NFK2 248 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 ARHGAP42A6NI28 874 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 H0Y626 953 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 KCNN4O15554 427 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 ECHS1P30084 290 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 DRG2P55039 364 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 GDF10P55107 478 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 SMAD4Q13485 552 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 CUL1Q13616 776 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 PTK6Q13882 451 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 PPP1R7Q15435 360 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 HEATR6Q6AI08 1181 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 OTOP3Q7RTS5 596 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 GSPT2Q8IYD1 628 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 CARNMT1Q8N4J0 409 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 ATPAF2Q8N5M1 289 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 EIF1ADQ8N9N8 165 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 HTR3CQ8WXA8 447 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 MAGEH1Q9H213 219 aa19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 THG1LQ9NWX6 298 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-202ENST00000284770 DENND4AQ7Z401 1863 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 ERLIN1O75477 346 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 ZNF189O75820 626 aaPredicted RBP19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 PENKP01210 267 aaPredicted RBP19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 CCNCP24863 283 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 GNA12Q03113 381 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 EML3Q32P44 896 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 BEND6Q5SZJ8 279 aaPredicted RBP19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 CXorf57Q6NSI4 855 aaKnown RBP19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 RHBDF2Q6PJF5 856 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 VITQ6UXI7 678 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 MFN1Q8IWA4 741 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 MFSD6LQ8IWD5 586 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 OR52K2Q8NGK3 314 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 AENQ8WTP8 325 aaKnown RBP19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 IFT81Q8WYA0 676 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 ELSPBP1Q96BH3 223 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 RTP4Q96DX8 246 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 HMCESQ96FZ2 354 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 FERMT1Q9BQL6 677 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 PLK2Q9NYY3 685 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 EPS15L1Q9UBC2 864 aa19.36■□□□□ 0.69
PDLIM3-202ENST00000284770 NUP205Q92621 2012 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 MAFKO60675 156 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 IFNB1P01574 187 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 KRT14P02533 472 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 RHOCP08134 193 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 VAV1P15498 845 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 IFNAR2P48551 515 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 FCHO2Q0JRZ9 810 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 CDH18Q13634 790 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 LY6G5CQ5SRR4 150 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 PARM1Q6UWI2 310 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 ZNF783Q6ZMS7 281 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 ARHGAP36Q6ZRI8 547 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 CCDC117Q8IWD4 279 aaPredicted RBP19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 CCDC89Q8N998 374 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 GLIS1Q8NBF1 620 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 ST13P5Q8NFI4 369 aaPredicted RBP19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 ARHGEF2Q92974 986 aaKnown RBP19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 HLA-CQ95604 372 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 FAM83CQ9BQN1 747 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 BBS2Q9BXC9 721 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 TRIM31Q9BZY9 425 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 DPH5Q9H2P9 285 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 ARFGAP3Q9NP61 516 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 FAM114A2Q9NRY5 505 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 ZNF446Q9NWS9 450 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 MARK1Q9P0L2 795 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 NFU1Q9UMS0 254 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 DOCK8Q8NF50 2099 aa19.35■□□□□ 0.69
PDLIM3-202ENST00000284770 A0A0D9SEW6 157 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 MTSS1O43312 755 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 MBTPS2O43462 519 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 RPL21P46778 160 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 SERINC3Q13530 473 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 TRIP13Q15645 432 aaPredicted RBP19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 ANO4Q32M45 955 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 FSCBQ5H9T9 825 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 TRIM68Q6AZZ1 485 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 MTSS1LQ765P7 747 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 PRUNE1Q86TP1 453 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 CCDC13Q8IYE1 715 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 FIBINQ8TAL6 211 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 CCHCR1Q8TD31 782 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 DEPDC1BQ8WUY9 529 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 FGF14Q92915 247 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 ASIC4Q96FT7 647 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 PCDH9Q9HC56 1237 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 GRHL1Q9NZI5 618 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms