RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 WDR5P61964 334 aaKnown RBP9.52□□□□□ -0.89
SSR3-201ENST00000265044 CDK16Q00536 496 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 CDH17Q12864 832 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 RASIP1Q5U651 963 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 NLRP14Q86W24 1093 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 HERC6Q8IVU3 1022 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 EFHBQ8N7U6 833 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 SPATA22Q8NHS9 363 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 GSDMBQ8TAX9 411 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 BLOC1S5Q8TDH9 187 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 SH3GL2Q99962 352 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 NAT9Q9BTE0 207 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 PITPNM3Q9BZ71 974 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 SLC39A8Q9C0K1 460 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 USP29Q9HBJ7 922 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 PCMTD2Q9NV79 361 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.52□□□□□ -0.89
SSR3-201ENST00000265044 TCRBV9S1A1TA0A576 114 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 ANKRD65E5RJM6 399 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 CCL16O15467 120 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 C8AP07357 584 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 PTPN3P26045 913 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 WEE1P30291 646 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 EFTUD2Q15029 972 aaKnown RBP eCLIP9.52□□□□□ -0.891e-9■■■□□ 16.5
SSR3-201ENST00000265044 TPGS2Q68CL5 300 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 FBXL22Q6P050 247 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 C14orf80Q86SX3 495 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 SLC26A11Q86WA9 606 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 PTPRN2Q92932 1015 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 CHMP6Q96FZ7 201 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 EXOC2Q96KP1 924 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 TGS1Q96RS0 853 aaKnown RBP9.52□□□□□ -0.89
SSR3-201ENST00000265044 CYP2S1Q96SQ9 504 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 UBE2OQ9C0C9 1292 aaKnown RBP9.52□□□□□ -0.89
SSR3-201ENST00000265044 OSBPL2Q9H1P3 480 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 ASAH2Q9NR71 780 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 SLC24A2Q9UI40 661 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 TCP11X1B4DZS4 312 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 AP3B1O00203 1094 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 MT-CYBP00156 380 aaPredicted RBP9.52□□□□□ -0.89
SSR3-201ENST00000265044 TACR2P21452 398 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 ALDH3A1P30838 453 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 MMP13P45452 471 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 TMPRSS15P98073 1019 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 ARHGAP15Q53QZ3 475 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 RNF219Q5W0B1 726 aaPredicted RBP9.52□□□□□ -0.89
SSR3-201ENST00000265044 TXNDC8Q6A555 127 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 NDUFAF2Q8N183 169 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 KLHL23Q8NBE8 558 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 CCT8L2Q96SF2 557 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 PPCSQ9HAB8 311 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 MTRRQ9UBK8 725 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 TBX21Q9UL17 535 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
SSR3-201ENST00000265044 ZSWIM8A7E2V4 1837 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 CAPN15O75808 1086 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 VAV1P15498 845 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 RPS24P62847 133 aaKnown RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 HSP90AA5PQ58FG0 334 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 UBAP2Q5T6F2 1119 aaKnown RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 EXOC3L1Q86VI1 746 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 RTL3Q8N8U3 475 aaKnown RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 ANKLE1Q8NAG6 615 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 KREMEN2Q8NCW0 462 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 EBNA1BP2Q99848 306 aaKnown RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 IL23AQ9NPF7 189 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 IL1RAPL1Q9NZN1 696 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 KLHL14Q9P2G3 628 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 TEX28O15482 410 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 ACSL4O60488 711 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 CNTN5O94779 1100 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 GJB5O95377 273 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 ERVK-10P10266 1014 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 RHOQP17081 205 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 CD86P42081 329 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 CYP4F8P98187 520 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 SETDB1Q15047 1291 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 TTC39BQ5VTQ0 682 aaPredicted RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 RSPO2Q6UXX9 243 aaPredicted RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 VSIG1Q86XK7 387 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 GPATCH11Q8N954 259 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 LRRC39Q96DD0 335 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 EPN3Q9H201 632 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 SMG5Q9UPR3 1016 aaKnown RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 TROVE2P10155 538 aaKnown RBP eCLIP9.51□□□□□ -0.89
SSR3-201ENST00000265044 ABCG1P45844 678 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 RECQLP46063 649 aaPredicted RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 OLIG2Q13516 323 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 PAFAH1B3Q15102 231 aaKnown RBP9.51□□□□□ -0.89
SSR3-201ENST00000265044 CFAP157Q5JU67 520 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 CERCAMQ5T4B2 595 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 LVRNQ6Q4G3 990 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 LIMS2Q7Z4I7 341 aa9.51□□□□□ -0.89
SSR3-201ENST00000265044 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms