RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LBPP18428 481 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 NR4A1P22736 598 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 KRT20P35900 424 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 USP4Q13107 963 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 SLC45A4Q5BKX6 768 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 OR7A2PQ8NGA2 310 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 IKZF4Q9H2S9 585 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 HMG20AQ9NP66 347 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 TRMT13Q9NUP7 481 aaKnown RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 ZNF222Q9UK12 451 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ADAM30Q9UKF2 790 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 DGKBQ9Y6T7 804 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 SALL3Q9BXA9 1300 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 FFAR3O14843 346 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 GPR42O15529 346 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 FAM155BO75949 473 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 HNRNPLP14866 589 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■■□ 21
SMG6-201ENST00000263073 GRIA4P48058 902 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 TUBP50607 506 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 TAF1CQ15572 869 aaPredicted RBP12.26□□□□□ -0.45
SMG6-201ENST00000263073 KRT77Q7Z794 578 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 RAET1EQ8TD07 263 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 BAP1Q92560 729 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 C1orf50Q9BV19 199 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 C17orf75Q9HAS0 396 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 ANAPC2Q9UJX6 822 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 LYVE1Q9Y5Y7 322 aa12.26□□□□□ -0.45
SMG6-201ENST00000263073 TMEM119Q4V9L6 283 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 DET1Q7L5Y6 550 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 CAB39LQ9H9S4 337 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 OGDHLQ9ULD0 1010 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 C17orf102A2RUQ5 167 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SEC24AO95486 1093 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 NFICP08651 508 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 USP17L7P0C7H9 530 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ATP6V1C1P21283 382 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SP100P23497 879 aaPredicted RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 KDELR1P24390 212 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 TSNQ15631 228 aaKnown RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 SAMD4BQ5PRF9 694 aaKnown RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 SPESP1Q6UW49 350 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ARHGAP36Q6ZRI8 547 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 C10orf107Q8IVU9 208 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SPATA20Q8TB22 786 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SPOCK2Q92563 424 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 NAT9Q9BTE0 207 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 RAD21L1Q9H4I0 556 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ERVK-5Q9HDB9 667 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 PCDHGC5Q9Y5F6 944 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 IL6P05231 212 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 FYNP06241 537 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ITGALP20701 1170 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 NEK3P51956 506 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SPIDRQ14159 915 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 MARC1Q5VT66 337 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 PIWIL2Q8TC59 973 aaKnown RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 CRAMP1Q96RY5 1269 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 GINS4Q9BRT9 223 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ZFP14Q9HCL3 533 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 AP4B1Q9Y6B7 739 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 LCA5LO95447 670 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 CNPP09543 421 aaKnown RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SLC2A14Q8TDB8 520 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 FNIP1Q8TF40 1166 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 KCTD4Q8WVF5 259 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ELMO1Q92556 727 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 HTRA1Q92743 480 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 UGT2B28Q9BY64 529 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 MMADHCQ9H3L0 296 aaPredicted RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
SMG6-201ENST00000263073 PCP4L1A6NKN8 68 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 LACTBL1A8MY62 500 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 PRR5-ARHGAP8B1AHC4 643 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMG6-201ENST00000263073 ITGAXP20702 1163 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 POLD2P49005 469 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 ARHGAP8P85298 464 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 C6orf52Q5T4I8 152 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 UNC5AQ6ZN44 842 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 FAM81AQ8TBF8 368 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 SETBP1Q9Y6X0 1596 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
SMG6-201ENST00000263073 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 LSM1O15116 133 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 LIASO43766 372 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 GLRA2P23416 452 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 JAK1P23458 1154 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 DNAJB2P25686 324 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 MAMLD1Q13495 774 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms