RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PDK1Q15118 436 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 LRRC36Q1X8D7 754 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 SFT2D3Q587I9 215 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 ZNF567Q8N184 647 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 WNT8BQ93098 351 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 KLHL4Q9C0H6 718 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 MEIS3P2A8K0S8 358 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 FAM72CH0Y354 149 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 DCLK1O15075 740 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 VCLP18206 1134 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 XIAPP98170 497 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 FAM72AQ5TYM5 149 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 ATG16L1Q676U5 607 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 TWF2Q6IBS0 349 aaKnown RBP23.1■■□□□ 1.29
MCF2L-201ENST00000261963 FAM72DQ6L9T8 149 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 FAM72BQ86X60 149 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 SIX6OS1Q8N1H7 587 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 C20orf27Q9GZN8 174 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 CRTAC1Q9NQ79 661 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 ANLNQ9NQW6 1124 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 SEPT10Q9P0V9 454 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 STAP1Q9ULZ2 295 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 ZNF510Q9Y2H8 683 aa23.1■■□□□ 1.29
MCF2L-201ENST00000261963 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 I6L893 689 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-201ENST00000261963 SNNO75324 88 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-201ENST00000261963 GSRP00390 522 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 AMHP03971 560 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 TKTL1P51854 596 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 MAP3K7CLP57077 242 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 CCL14Q16627 93 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 DBN1Q16643 649 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 CCNYQ8ND76 341 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 hCG_2014768A0A024R1R8 64 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.09■■□□□ 1.29
MCF2L-201ENST00000261963 STK10O94804 968 aaKnown RBP23.09■■□□□ 1.29
MCF2L-201ENST00000261963 ALDOAP04075 364 aaKnown RBP23.09■■□□□ 1.29
MCF2L-201ENST00000261963 CNTFP26441 200 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 SFSWAPQ12872 951 aaKnown RBP23.09■■□□□ 1.29
MCF2L-201ENST00000261963 MMEL1Q495T6 779 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 MAP3K21Q5TCX8 1036 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 PACS1Q6VY07 963 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 MED10Q9BTT4 135 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 C1orf21Q9H246 121 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 SYBUQ9NX95 663 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 PSAT1Q9Y617 370 aa23.09■■□□□ 1.29
MCF2L-201ENST00000261963 C17orf102A2RUQ5 167 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 EEF2KO00418 725 aaKnown RBP23.08■■□□□ 1.29
MCF2L-201ENST00000261963 PGAM1P18669 254 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 CHN2P52757 468 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 HPCAP84074 193 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 MSLNQ13421 630 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-201ENST00000261963 IRF5Q13568 498 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 PDK3Q15120 406 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 KLC3Q6P597 504 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 ARID3BQ8IVW6 561 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-201ENST00000261963 ULBP1Q9BZM6 244 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 WWP1Q9H0M0 922 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 ZNF638Q14966 1978 aaKnown RBP23.08■■□□□ 1.29
MCF2L-201ENST00000261963 SCN4AP35499 1836 aa23.08■■□□□ 1.29
MCF2L-201ENST00000261963 BIRC5O15392 142 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 TBCCQ15814 346 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 BSPRYQ5W0U4 402 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 LPCAT4Q643R3 524 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 B3GNT6Q6ZMB0 384 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 GSTCDQ8NEC7 633 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 RAB3IL1Q8TBN0 382 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 ADAM32Q8TC27 787 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 WDR6Q9NNW5 1121 aaKnown RBP23.08■■□□□ 1.28
MCF2L-201ENST00000261963 XPNPEP3Q9NQH7 507 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 TMEM30AQ9NV96 361 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 IGSF9Q9P2J2 1179 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 EMCNQ9ULC0 261 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 PCDHGA4Q9Y5G9 962 aa23.08■■□□□ 1.28
MCF2L-201ENST00000261963 TSC2P49815 1807 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 YJEFN3A6XGL0 299 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 HOXC8P31273 242 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 ADRA1BP35368 520 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 CPT1AP50416 773 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 AQP4P55087 323 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 GPRIN1Q7Z2K8 1008 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 PYDC1Q8WXC3 89 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 BLOC1S6Q9UL45 172 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 DNAH12Q6ZR08 3092 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 FAM163BP0C2L3 166 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 AFF1P51825 1210 aaKnown RBP23.07■■□□□ 1.28
MCF2L-201ENST00000261963 RPL26P61254 145 aaKnown RBP23.07■■□□□ 1.28
MCF2L-201ENST00000261963 DLG1Q12959 904 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 SEMA3BQ13214 749 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 OLIG2Q13516 323 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 ZCCHC23Q6ZST2 131 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 SLC7A14Q8TBB6 771 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 SENP8Q96LD8 212 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 CATSPER2Q96P56 530 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 SMOQ99835 787 aa23.07■■□□□ 1.28
MCF2L-201ENST00000261963 KCNK1O00180 336 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 TPP1O14773 563 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 DAOAP59103 153 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 PDE1CQ14123 709 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 C16orf46Q6P387 395 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms