RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SLC10A6Q3KNW5 377 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 ITPRIPL1Q6GPH6 555 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 DUS1LQ6P1R4 473 aaKnown RBP13.27□□□□□ -0.29
SNX1-201ENST00000261889 UTS2BQ765I0 119 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 LRTOMTQ8WZ04 291 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 EME1Q96AY2 570 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 FAM192AQ9GZU8 254 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
SNX1-201ENST00000261889 PPCSQ9HAB8 311 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 MTMR10Q9NXD2 777 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 ARHGEF38Q9NXL2 777 aa13.27□□□□□ -0.29
SNX1-201ENST00000261889 PDLIM1O00151 329 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 L1CAMP32004 1257 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
SNX1-201ENST00000261889 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TRIM42Q8IWZ5 723 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.26□□□□□ -0.298e-11■□□□□ 8.9
SNX1-201ENST00000261889 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 CCDC167Q9P0B6 97 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 SAC3D1A6NKF1 404 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 HNRNPCP07910 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNX1-201ENST00000261889 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
SNX1-201ENST00000261889 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TAZQ16635 292 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 NOMO2Q5JPE7 1267 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 NCBP2-AS2Q69YL0 99 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 DENND6AQ8IWF6 608 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 ACTRT2Q8TDY3 377 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 CMTM5Q96DZ9 223 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 SPATA33Q96N06 139 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 FTHL17Q9BXU8 183 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 GGA3Q9NZ52 723 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 SCN1AP35498 2009 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 H0YCG3 227 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 FBXO21O94952 628 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 C2P06681 752 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 PABPC4LP0CB38 370 aaKnown RBP13.26□□□□□ -0.29
SNX1-201ENST00000261889 CES1P23141 567 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 CDH5P33151 784 aaPredicted RBP13.26□□□□□ -0.29
SNX1-201ENST00000261889 CCR3P51677 355 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 ART3Q13508 389 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TNFAIP1Q13829 316 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 MAP7Q14244 749 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 SURF1Q15526 300 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 OLFML1Q6UWY5 402 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TSHZ1Q6ZSZ6 1077 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TRIM74Q86UV6 250 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 LENG1Q96BZ8 264 aaPredicted RBP13.26□□□□□ -0.29
SNX1-201ENST00000261889 SLC29A1Q99808 456 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 SENP6Q9GZR1 1112 aaPredicted RBP13.26□□□□□ -0.29
SNX1-201ENST00000261889 HESX1Q9UBX0 185 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 FETUBQ9UGM5 382 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 PTGDR2Q9Y5Y4 395 aa13.26□□□□□ -0.29
SNX1-201ENST00000261889 MGAMO43451 1857 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 CCNT2O60583 730 aaKnown RBP13.25□□□□□ -0.29
SNX1-201ENST00000261889 GNAO1P09471 354 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 YAP1P46937 504 aaKnown RBP13.25□□□□□ -0.29
SNX1-201ENST00000261889 GRIA4P48058 902 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 DGKDQ16760 1214 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 PLA2G4EQ3MJ16 856 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 PGM2L1Q6PCE3 622 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 HFE2Q6ZVN8 426 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 KBTBD6Q86V97 674 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 NT5DC4Q86YG4 428 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
SNX1-201ENST00000261889 MOCS1Q9NZB8 636 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 C7orf72A4D263 438 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 ZBTB42B2RXF5 422 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 AURKAO14965 403 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 PLA2G6O60733 806 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 GLRA3O75311 464 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 KLHL2O95198 593 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 KYAT3Q6YP21 454 aaKnown RBP13.25□□□□□ -0.29
SNX1-201ENST00000261889 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 ZNF567Q8N184 647 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 OLFM3Q96PB7 478 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 TNFRSF12AQ9NP84 129 aa13.25□□□□□ -0.29
SNX1-201ENST00000261889 TGM2P21980 687 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 NR4A1P22736 598 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 MAGEA10P43363 369 aaPredicted RBP13.24□□□□□ -0.29
SNX1-201ENST00000261889 MPP1Q00013 466 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 NOL9Q5SY16 702 aaKnown RBP13.24□□□□□ -0.29
SNX1-201ENST00000261889 SYPL2Q5VXT5 272 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 LDB1Q86U70 411 aaPredicted RBP13.24□□□□□ -0.29
SNX1-201ENST00000261889 TRIML2Q8N7C3 387 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 MCUQ8NE86 351 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 SPATA22Q8NHS9 363 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 CDKL2Q92772 493 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 COQ10BQ9H8M1 238 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 WDR41Q9HAD4 459 aa13.24□□□□□ -0.29
SNX1-201ENST00000261889 ATXN10Q9UBB4 475 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms