RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SNX9Q9Y5X1 595 aa9.4□□□□□ -0.91
RPA1-201ENST00000254719 PDGFRBP09619 1106 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 PPARGP37231 505 aaPredicted RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 NUMBP49757 651 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 TWF2Q6IBS0 349 aaKnown RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 NOTUMQ6P988 496 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 TMEM154Q6P9G4 183 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 ZNF567Q8N184 647 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 C2orf69Q8N8R5 385 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 MCUQ8NE86 351 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 CATSPER1Q8NEC5 780 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 DNAJB3Q8WWF6 145 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 FAM111AQ96PZ2 611 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 NPHS2Q9NP85 383 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 PAPOLBQ9NRJ5 636 aaKnown RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 IPPQ9Y573 584 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 G3V2L1 256 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 TGM2P21980 687 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 SPRP35270 261 aaPredicted RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 ITKQ08881 620 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 PARP6Q2NL67 630 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 GPR78Q96P69 363 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 ZNF385DQ9H6B1 395 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 MANSC1Q9H8J5 431 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 DERAQ9Y315 318 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 OPHN1O60890 802 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 SNUPNO95149 360 aaKnown RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 ACAT1P24752 427 aaKnown RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 LRPAP1P30533 357 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 CCR10P46092 362 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 ZNF135P52742 658 aaPredicted RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 BEX3Q00994 111 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 BTKQ06187 659 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 SLC27A1Q6PCB7 646 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 AGMOQ6ZNB7 445 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 TIFABQ6ZNK6 161 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 ST13P4Q8IZP2 240 aaPredicted RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 LRRC52Q8N7C0 313 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 GPRC5AQ8NFJ5 357 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 SRPK1Q96SB4 655 aaKnown RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 TRIM15Q9C019 465 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 NOL6Q9H6R4 1146 aaKnown RBP9.39□□□□□ -0.91
RPA1-201ENST00000254719 PLEKHA5Q9HAU0 1116 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 CSNK1G1Q9HCP0 422 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 ETAA1Q9NY74 926 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 DCTN4Q9UJW0 460 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 PCDHGB4Q9UN71 923 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 PCDHGB5Q9Y5G0 923 aa9.39□□□□□ -0.91
RPA1-201ENST00000254719 FREM2Q5SZK8 3169 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 MYBPHLA2RUH7 354 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 FAM155AB1AL88 458 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 F5H423 210 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 WISP3O95389 354 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 APRTP07741 180 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 SERPINB3P29508 390 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 CPA2P48052 419 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 TRIM32Q13049 653 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 TCTN1Q2MV58 587 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 MDH1BQ5I0G3 518 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 MANEALQ5VSG8 457 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 OR6J1Q8NGC5 347 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 APOPT1Q96IL0 206 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 AGAP2Q99490 1192 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 EBNA1BP2Q99848 306 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 DRC3Q9H069 523 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 UPF3AQ9H1J1 476 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 ARMCX1Q9P291 453 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 LRRC42Q9Y546 428 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 NRCAMQ92823 1304 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 TYW5A2RUC4 315 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 SDR42E2A6NKP2 422 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 RARBP10826 455 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 PCSK1P29120 753 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 IRX1P78414 480 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 PAFAH1B3Q15102 231 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 SLC45A4Q5BKX6 768 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 ANO7Q6IWH7 933 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 PID1Q7Z2X4 250 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 PIGZQ86VD9 579 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 ARHGAP12Q8IWW6 846 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 ACSS2Q9NR19 701 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 F8W8V4 182 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 H2AFYO75367 372 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 ALOX15P16050 662 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 NCF2P19878 526 aaPredicted RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 RAB27AP51159 221 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 PURAQ00577 322 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 DLG1Q12959 904 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 PCBP1Q15365 356 aaKnown RBP eCLIP9.38□□□□□ -0.91
RPA1-201ENST00000254719 SLC30A9Q6PML9 568 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 ZCCHC23Q6ZST2 131 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 SLC26A11Q86WA9 606 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 ABI1Q8IZP0 508 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 ZNF398Q8TD17 642 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms