RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 NCEH1Q6PIU2 408 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 APCDD1Q8J025 514 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 LGI2Q8N0V4 545 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 CARNMT1Q8N4J0 409 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 OR2T34Q8NGX1 318 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 RHBDD1Q8TEB9 315 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 FRS2Q8WU20 508 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 ZNF606Q8WXB4 792 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 PTPRN2Q92932 1015 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 BTN2A3PQ96KV6 586 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 SLC6A18Q96N87 628 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 SLC2A13Q96QE2 648 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 THAP9Q9H5L6 903 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
VPS50-201ENST00000251739 POPDC2Q9HBU9 364 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 ACP6Q9NPH0 428 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 ST7Q9NRC1 585 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 EVA1BQ9NVM1 165 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 TJP2Q9UDY2 1190 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 CTNND2Q9UQB3 1225 aa10.65□□□□□ -0.7
VPS50-201ENST00000251739 A0A1B0GVM2 712 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 A0A1W2PP55 124 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 TCAF2A6NFQ2 919 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 LRRC72A6NJI9 287 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 KCNK3O14649 394 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 WNT9AO14904 365 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 RNASEH1O60930 286 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 RNASEH2AO75792 299 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 LETM1O95202 739 aaPredicted RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 STK19P49842 368 aaPredicted RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 PLK1P53350 603 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ADPRHP54922 357 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ECT2LQ008S8 904 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 SFSWAPQ12872 951 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 PAK1Q13153 545 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 SLC12A1Q13621 1099 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ELAVL3Q14576 367 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 SUZ12Q15022 739 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 TAF5Q15542 800 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 RAP1GAP2Q684P5 730 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 CXorf57Q6NSI4 855 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 TRIM65Q6PJ69 517 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ENOSF1Q7L5Y1 443 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 CHSY1Q86X52 802 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 MMAAQ8IVH4 418 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 WDTC1Q8N5D0 677 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 MDM1Q8TC05 714 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 SHC3Q92529 594 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ALG14Q96F25 216 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 MED15Q96RN5 788 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ACE2Q9BYF1 805 aaPredicted RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 NEUROG2Q9H2A3 272 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 ASNSD1Q9NWL6 643 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
VPS50-201ENST00000251739 NCKAP1Q9Y2A7 1128 aa10.64□□□□□ -0.71
VPS50-201ENST00000251739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS50-201ENST00000251739 TRPM6Q9BX84 2022 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 TDRD6O60522 2096 aaKnown RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 BIN1O00499 593 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 MED7O43513 233 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 MOCS3O95396 460 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 GLI1P08151 1106 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 KRT5P13647 590 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 VAV1P15498 845 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 GOT1P17174 413 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 C5AR1P21730 350 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 MZF1P28698 734 aaPredicted RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 GNA15P30679 374 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 SLC8A1P32418 973 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 PSMD8P48556 350 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 IRAK1P51617 712 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 METAP1P53582 386 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 STX17P56962 302 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 PPP2CBP62714 309 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 PPP2CAP67775 309 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 TTC39BQ5VTQ0 682 aaPredicted RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 SFMBT2Q5VUG0 894 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 OTUD1Q5VV17 481 aaPredicted RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 KANSL1Q7Z3B3 1105 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 CIR1Q86X95 450 aaPredicted RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 MARCH9Q86YJ5 346 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 CCAR2Q8N163 923 aaKnown RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 STK40Q8N2I9 435 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 RPL10LQ96L21 214 aaKnown RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 CPXM1Q96SM3 734 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 ELF4Q99607 663 aaPredicted RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 SRRTQ9BXP5 876 aaKnown RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 UBE2TQ9NPD8 197 aaPredicted RBP10.63□□□□□ -0.71
VPS50-201ENST00000251739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS50-201ENST00000251739 OR51B4Q9Y5P0 310 aa10.63□□□□□ -0.71
VPS50-201ENST00000251739 MGAQ8IWI9 3026 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 GTPBP10A4D1E9 387 aaKnown RBP10.62□□□□□ -0.71
VPS50-201ENST00000251739 FAM47DPA6NHR8 397 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 F5H5T6 163 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 CAPN9O14815 690 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 THAP12O43422 761 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 HSF2BPO75031 334 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 GADD45BO75293 160 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms