RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 TMEM198Q66K66 360 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 KATNAL2Q8IYT4 538 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 TFAP2BQ92481 460 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 DDX1Q92499 740 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 CD101Q93033 1021 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 COG4Q9H9E3 785 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 A0A088AWK7 358 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 PDLIM1O00151 329 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 OGTO15294 1046 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ASNA1O43681 348 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 VTNP04004 478 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 NUMBP49757 651 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 LAMC2Q13753 1193 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 USP10Q14694 798 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 MON1BQ7L1V2 547 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 NIPA1Q7RTP0 329 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 DSELQ8IZU8 1212 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 RNF34Q969K3 372 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 HERC2P3Q9BVR0 1158 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ZNF358Q9NW07 568 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ATP6AP2A0A1C7CYW4 349 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 WDR27A2RRH5 827 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 DNAJA2O60884 412 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 GLRA3O75311 464 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ATP6AP2O75787 350 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 BPGMP07738 259 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 CCNA2P20248 432 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 PLK1P53350 603 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 SP2Q02086 613 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 LAMTOR4Q0VGL1 99 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 SPATA6LQ8N4H0 392 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 PRICKLE1Q96MT3 831 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 C9JVG2 144 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 TMEM63AO94886 807 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 CHEK2O96017 543 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 MIPP30301 263 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 SDC4P31431 198 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 SIX1Q15475 284 aaPredicted RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 PABPC1LQ4VXU2 614 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 FRMD8Q9BZ67 464 aaPredicted RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 CAB39Q9Y376 341 aaPredicted RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 LAMB1P07942 1786 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 TSC22D2O75157 780 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 KCNA2P16389 499 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 BCAP31P51572 246 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 FKBP1AP62942 108 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 CCNIQ14094 377 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 CCDC85BQ15834 202 aaPredicted RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 RNASEH2BQ5TBB1 312 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 IQSEC1Q6DN90 963 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 ANKS1BQ7Z6G8 1248 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 ACOT1Q86TX2 421 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 SYTL1Q8IYJ3 562 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 RXFP2Q8WXD0 754 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 PLEKHA5Q9HAU0 1116 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 USP18Q9UMW8 372 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 FADS3Q9Y5Q0 445 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 TNPO2O14787 897 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 MAFGO15525 162 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 H6PDO95479 791 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 APOA1P02647 267 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 UBA1P22314 1058 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 IVDP26440 423 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 RBL1P28749 1068 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 INPP5AQ14642 412 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 RHBDF2Q6PJF5 856 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 UNC5BQ8IZJ1 945 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 SCAIQ8N9R8 606 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 GRIN3AQ8TCU5 1115 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 REXO4Q9GZR2 422 aaKnown RBP13.55□□□□□ -0.24
CCDC117-201ENST00000249064 PORCNQ9H237 461 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 GPRC5DQ9NZD1 345 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 PAK5Q9P286 719 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 ITGB1BP2Q9UKP3 347 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 NENFQ9UMX5 172 aa13.55□□□□□ -0.24
CCDC117-201ENST00000249064 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 PIK3R1P27986 724 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 ZFP1Q6P2D0 407 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 ZNF410Q86VK4 478 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 SNX29P2Q8IUI4 249 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 POC5Q8NA72 575 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms