RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 RWDD4Q6NW29 188 aaKnown RBP24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 DCAF4L2Q8NA75 395 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 RPL10LQ96L21 214 aaKnown RBP24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 RBSNQ9H1K0 784 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 TMEM248Q9NWD8 314 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 ZNF212Q9UDV6 495 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 SLCO3A1Q9UIG8 710 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 SCML1Q9UN30 329 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 CYP8B1Q9UNU6 501 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 NYNRINQ9P2P1 1898 aaKnown RBP24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 ABCA7Q8IZY2 2146 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 IGLV3-19P01714 112 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 SPEM2Q0P670 501 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 SFSWAPQ12872 951 aaKnown RBP24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 CSRP2Q16527 193 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 ZNF776Q68DI1 518 aaPredicted RBP24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 FRMD1Q8N878 549 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 EPAS1Q99814 870 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 ANP32EQ9BTT0 268 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 THAP2Q9H0W7 228 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 ARRDC1-AS1Q9H2J1 176 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 NENFQ9UMX5 172 aa24.97■■□□□ 1.59
SDF2L1-201ENST00000248958 CXorf51AA0A1B0GTR3 108 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 TTC34A8MYJ7 566 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 AKR1B15C9JRZ8 316 aaPredicted RBP24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 FAM72CH0Y354 149 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 ATP9BO43861 1147 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 SIN3BO75182 1162 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 NDUFS2O75306 463 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 DNTTP04053 509 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 CYP1A2P05177 515 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 CD6P30203 668 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 RPL6Q02878 288 aaKnown RBP24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 TBX2Q13207 712 aaPredicted RBP24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 TTC31Q49AM3 519 aaPredicted RBP24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 C9orf64Q5T6V5 341 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 FAM72AQ5TYM5 149 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 FAM72DQ6L9T8 149 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 NLRP14Q86W24 1093 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 FAM72BQ86X60 149 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 PSTKQ8IV42 348 aaKnown RBP24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 RSPH9Q9H1X1 276 aaPredicted RBP24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 CATSPERBQ9H7T0 1116 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 SEMA4GQ9NTN9 838 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 DONSONQ9NYP3 566 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 USP18Q9UMW8 372 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 HS3ST2Q9Y278 367 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 NUP205Q92621 2012 aa24.96■■□□□ 1.59
SDF2L1-201ENST00000248958 CHD5Q8TDI0 1954 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 PRPSAP2O60256 369 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 TGM1P22735 817 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 DHPSP49366 369 aaPredicted RBP24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 STK19P49842 368 aaPredicted RBP24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 TPMTP51580 245 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 GALCP54803 685 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 ADKP55263 362 aaKnown RBP24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 RPS14P62263 151 aaKnown RBP24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 GNA12Q03113 381 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 ZNF252P-AS1Q0IIN9 211 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 PIGHQ14442 188 aaPredicted RBP24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 ERMARDQ5T6L9 678 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 SH2D3CQ8N5H7 860 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 PTPRN2Q92932 1015 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 PSMB7Q99436 277 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 VPS45Q9NRW7 570 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 IP6K2Q9UHH9 426 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 VPS51Q9UID3 782 aa24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 TNRC6BQ9UPQ9 1833 aaKnown RBP24.95■■□□□ 1.58
SDF2L1-201ENST00000248958 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 A0A0D9SEW6 157 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 BCLAF3A2AJT9 711 aaKnown RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 AKR1B10O60218 316 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 EPHB2P29323 1055 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 PCK1P35558 622 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 MPLP40238 635 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 CLCN6P51797 869 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 ZNF135P52742 658 aaPredicted RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 CREB5Q02930 508 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 GFPT1Q06210 699 aaPredicted RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 SLC20A2Q08357 652 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 ELAVL3Q14576 367 aaKnown RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 ASTE1Q2TB18 679 aaPredicted RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 RETSATQ6NUM9 610 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 CYP2U1Q7Z449 544 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 TMEFF1Q8IYR6 380 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 KIAA2013Q8IYS2 634 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 MRFAP1L1Q96HT8 127 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 CCDC42Q96M95 316 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 MAGEB5Q9BZ81 275 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 MAGEH1Q9H213 219 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 ATP13A1Q9HD20 1204 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 WSB2Q9NYS7 404 aaPredicted RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 AP4E1Q9UPM8 1137 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 NEU3Q9UQ49 428 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 RIF1Q5UIP0 2472 aaKnown RBP24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 CFAP54Q96N23 3096 aa24.94■■□□□ 1.58
SDF2L1-201ENST00000248958 WASH4PA8MWX3 477 aa24.93■■□□□ 1.58
SDF2L1-201ENST00000248958 FGF10O15520 208 aaPredicted RBP24.93■■□□□ 1.58
SDF2L1-201ENST00000248958 CREB3O43889 395 aa24.93■■□□□ 1.58
SDF2L1-201ENST00000248958 H2AFZP0C0S5 128 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms