RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SCML1Q9UN30 329 aa13.12□□□□□ -0.31
VPREB3-201ENST00000248948 HS3ST2Q9Y278 367 aa13.12□□□□□ -0.31
VPREB3-201ENST00000248948 INVSQ9Y283 1065 aa13.12□□□□□ -0.31
VPREB3-201ENST00000248948 SNX10Q9Y5X0 201 aa13.12□□□□□ -0.31
VPREB3-201ENST00000248948 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 ILVBLA1L0T0 632 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 EIF3CLB5ME19 914 aaKnown RBP13.11□□□□□ -0.31
VPREB3-201ENST00000248948 SIN3BO75182 1162 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 DNTTP04053 509 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 TPM1P09493 284 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 ZNF806P0C7X5 589 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 RHOQP17081 205 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 SDHBP21912 280 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 PSMA2P25787 234 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 OR1E1P30953 314 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 L1CAMP32004 1257 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 HTR7P34969 479 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 STK19P49842 368 aaPredicted RBP13.11□□□□□ -0.31
VPREB3-201ENST00000248948 TPMTP51580 245 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 CLCN6P51797 869 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 KRT83P78385 493 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 OGDHQ02218 1023 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 CREB5Q02930 508 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 TFAP2DQ7Z6R9 452 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 SLFN11Q7Z7L1 901 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 EIF3CQ99613 913 aaKnown RBP13.11□□□□□ -0.31
VPREB3-201ENST00000248948 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 CD93Q9NPY3 652 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 TMEM248Q9NWD8 314 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 CACNA1AO00555 2505 aa13.11□□□□□ -0.31
VPREB3-201ENST00000248948 DCHS1Q96JQ0 3298 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 TMEM191CA6NGB0 347 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 ALOX15BO15296 676 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 ATP9BO43861 1147 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 RNASEH1O60930 286 aaKnown RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 SRGAP2O75044 1071 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 MFAP3LO75121 409 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 LRIG2O94898 1065 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 PTGER3P43115 390 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 RPS14P62263 151 aaKnown RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 ZNF252P-AS1Q0IIN9 211 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 C9orf64Q5T6V5 341 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 USP30Q70CQ3 517 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 RABEPKQ7Z6M1 372 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 NLRP14Q86W24 1093 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 SH2D3CQ8N5H7 860 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 FRMD1Q8N878 549 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 C12orf50Q8NA57 414 aaPredicted RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 CADM4Q8NFZ8 388 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 CPLX3Q8WVH0 158 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 PSMB7Q99436 277 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 EPAS1Q99814 870 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
VPREB3-201ENST00000248948 VPS51Q9UID3 782 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 FZD10Q9ULW2 581 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 NENFQ9UMX5 172 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 PLXNA2O75051 1894 aa13.1□□□□□ -0.31
VPREB3-201ENST00000248948 A0A087X0T9 212 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 SSU72P8A0A1W2PR75 194 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 TTC34A8MYJ7 566 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 FGF10O15520 208 aaPredicted RBP13.09□□□□□ -0.31
VPREB3-201ENST00000248948 NDUFS2O75306 463 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 RNF8O76064 485 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 ADH1BP00325 375 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
VPREB3-201ENST00000248948 FAM228BP0C875 321 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 LAMA1P25391 3075 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 LIMK1P53667 647 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 GNA12Q03113 381 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 DNAH14Q0VDD8 3507 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 ACAP1Q15027 740 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 CST6Q15828 149 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 DSG4Q86SJ6 1040 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 SYT12Q8IV01 421 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 PSTKQ8IV42 348 aaKnown RBP13.09□□□□□ -0.31
VPREB3-201ENST00000248948 CNGA4Q8IV77 575 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 NETO1Q8TDF5 533 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms