RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CPLX4Q7Z7G2 160 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 ARHGAP18Q8N392 663 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 DYDC1Q8WWB3 177 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 TBC1D31Q96DN5 1066 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 NKIRAS1Q9NYS0 192 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 CLIC5Q9NZA1 410 aa23.89■■□□□ 1.41
SYNGR3-201ENST00000248121 FAM155BO75949 473 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 CXCL14O95715 111 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 GSTA2P09210 222 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 KRT4P19013 534 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 SLC18A1P54219 525 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 MLLT6P55198 1093 aaPredicted RBP23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 TEX44Q53QW1 395 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 C10orf120Q5SQS8 335 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 GSDMBQ8TAX9 411 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 AGAP3Q96P47 875 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 PCDHA11Q9Y5I1 949 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 NYNRINQ9P2P1 1898 aaKnown RBP23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 E9PAM4 449 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 MTSS1O43312 755 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 TLR5O60602 858 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 ZNF189O75820 626 aaPredicted RBP23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 HMBSP08397 361 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 HTR7P34969 479 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 RPA3P35244 121 aaPredicted RBP23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 NRG1Q02297 640 aaPredicted RBP23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 SHHQ15465 462 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 DOCK4Q8N1I0 1966 aa23.88■■□□□ 1.41
SYNGR3-201ENST00000248121 CARNS1A5YM72 827 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 FGF10O15520 208 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ASMTLO95671 621 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MGAT1P26572 445 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MAGEA10P43363 369 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 TUBP50607 506 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SESN2P58004 480 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 STEAP4Q687X5 459 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 KCTD11Q693B1 232 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 TAX1BP1Q86VP1 789 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ZNF683Q8IZ20 524 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 PPM1NQ8N819 430 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 POF1BQ8WVV4 589 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 STAMBPL1Q96FJ0 436 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ZNF419Q96HQ0 510 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SGSM3Q96HU1 749 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SEC16BQ96JE7 1060 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ZNF512Q96ME7 567 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MLPHQ9BV36 600 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 UBE2OQ9C0C9 1292 aaKnown RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 GBA3Q9H227 469 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MPP6Q9NZW5 540 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 HSFX1Q9UBD0 423 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SMG5Q9UPR3 1016 aaKnown RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 UGT1A9O60656 530 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 INHBAP08476 426 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 IRS1P35568 1242 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ALDH1A3P47895 512 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 TBX4P57082 545 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 COL13A1Q5TAT6 717 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SLC26A11Q86WA9 606 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 LRRC6Q86X45 466 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 TCEAL8Q8IYN2 117 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 CNTD1Q8N815 330 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SPPL3Q8TCT6 385 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 C1orf74Q96LT6 269 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 TEKT5Q96M29 485 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 KLHL5Q96PQ7 755 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 KLF6Q99612 283 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SLC39A8Q9C0K1 460 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 CATSPERBQ9H7T0 1116 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 UGT1A7Q9HAW7 530 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 UGT1A10Q9HAW8 530 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 UGT1A8Q9HAW9 530 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ZNF334Q9HCZ1 680 aaPredicted RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 SSU72Q9NP77 194 aaKnown RBP23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 ENTPD7Q9NQZ7 604 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 COMMD8Q9NX08 183 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MOCS1Q9NZB8 636 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MARCH2Q9P0N8 246 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 TRHDEQ9UKU6 1024 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 GRID1Q9ULK0 1009 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 DENND4CQ5VZ89 1909 aa23.87■■□□□ 1.41
SYNGR3-201ENST00000248121 MTCL1Q9Y4B5 1905 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 SDR42E2A6NKP2 422 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 FAM159BA6NKW6 160 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 TCP11X1B4DZS4 312 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 DFFAO00273 331 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 JCHAINP01591 159 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 CA3P07451 260 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 VIMP08670 466 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 CSH1P0DML2 217 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 CSH2P0DML3 217 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 NFKB1P19838 968 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 CAMK1Q14012 370 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 SLC1A5Q15758 541 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 SH2D5Q6ZV89 423 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 CTAGE3PQ8IX95 158 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 OXNAD1Q96HP4 312 aaPredicted RBP23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 ABHD8Q96I13 439 aa23.86■■□□□ 1.41
SYNGR3-201ENST00000248121 SERAC1Q96JX3 654 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms