RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 CD101Q93033 1021 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 TESCQ96BS2 214 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ZNF607Q96SK3 696 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CATSPERZQ9NTU4 200 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 HMGXB4Q9UGU5 601 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 NEMP2A6NFY4 417 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ACAP2Q15057 778 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 MICU2Q8IYU8 434 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 TTYH1Q9H313 450 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 EXOSC4Q9NPD3 245 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 OPTCQ9UBM4 332 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 DCTN4Q9UJW0 460 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ZNF180Q9UJW8 692 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 XPO1O14980 1071 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 CST8O60676 142 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ACAT1P24752 427 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 WEE1P30291 646 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 AVPR1BP47901 424 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CTCFP49711 727 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 IL18R1Q13478 541 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 EPHA10Q5JZY3 1008 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 PDSS1Q5T2R2 415 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ZNF618Q5T7W0 954 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 LIN54Q6MZP7 749 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 TXNDC11Q6PKC3 985 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 ADGRG2Q8IZP9 1017 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 LRRC71Q8N4P6 559 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ZNF717Q9BY31 904 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 ADAM21Q9UKJ8 722 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 GTF3C4Q9UKN8 822 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 PCDHB3Q9Y5E6 796 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 PREX1Q8TCU6 1659 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CYP7B1O75881 506 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CYP17A1P05093 508 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 ABTB1Q969K4 478 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 PRICKLE1Q96MT3 831 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 IRAK3Q9Y616 596 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ZNF268Q14587 947 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 RABL6Q3YEC7 729 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 ATG14Q6ZNE5 492 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CPNE1Q99829 537 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 TLR7Q9NYK1 1049 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 NFIBO00712 420 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 MB21D2Q8IYB1 491 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 NKAPQ8N5F7 415 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 SNIP1Q8TAD8 396 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 EEF2KMTQ96G04 330 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 IL22Q9GZX6 179 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ANKZF1Q9H8Y5 726 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 AGO4Q9HCK5 861 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 VPS45Q9NRW7 570 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 DNAJC28Q9NX36 388 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 AP4E1Q9UPM8 1137 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CCDC162PA2VCL2 907 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 CYP2D6P10635 497 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ME2P23368 584 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 CHSY3Q70JA7 882 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ACOT9Q9Y305 439 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 NUDT2P50583 147 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 DUSP3P51452 185 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 ILDR2Q71H61 639 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 FAM120BQ96EK7 910 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 TMEM117Q9H0C3 514 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 LMAN2LQ9H0V9 348 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 NT5MQ9NPB1 228 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 INTS10Q9NVR2 710 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 PACSIN3Q9UKS6 424 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RIMBP3CA6NJZ7 1639 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RIMBP3BA6NNM3 1639 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RIMBP3Q9UFD9 1639 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 PEX12O00623 359 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ATP9AO75110 1047 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 AKT2P31751 481 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RAET1GQ6H3X3 334 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SPATA21Q7Z572 469 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ARHGEF19Q8IW93 802 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 MAB21L3Q8N8X9 362 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ITCHQ96J02 903 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 IRF2BPLQ9H1B7 796 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 NOX1Q9Y5S8 564 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 MOXD2PA6NHM9 499 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RECQL5O94762 991 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 FEN1P39748 380 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 MMP13P45452 471 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ALDH5A1P51649 535 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 CCR4P51679 360 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 OAFQ86UD1 273 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TNS4Q8IZW8 715 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 UBA3Q8TBC4 463 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ASCC2Q9H1I8 757 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 POPDC2Q9HBU9 364 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ANGPT4Q9Y264 503 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms