RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 NAPEPLDQ6IQ20 393 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 C16orf46Q6P387 395 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 LINC00523Q86TU6 105 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 CNTD1Q8N815 330 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 OR6Y1Q8NGX8 325 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 CFAP61Q8NHU2 1237 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 ZNF669Q96BR6 464 aaPredicted RBP16.52■□□□□ 0.23
UBE3D-201ENST00000237186 PRR11Q96HE9 360 aaPredicted RBP16.52■□□□□ 0.23
UBE3D-201ENST00000237186 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 SOX13Q9UN79 622 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 GABRQQ9UN88 632 aa16.52■□□□□ 0.23
UBE3D-201ENST00000237186 C2orf71A6NGG8 1288 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 PEX11AO75192 247 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 ALDH1A1P00352 501 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 ESRRAP11474 423 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-201ENST00000237186 SERPINB8P50452 374 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 CSE1LP55060 971 aaKnown RBP16.51■□□□□ 0.23
UBE3D-201ENST00000237186 AQP5P55064 265 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 TBCCQ15814 346 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 TRIM71Q2Q1W2 868 aaKnown RBP16.51■□□□□ 0.23
UBE3D-201ENST00000237186 CERCAMQ5T4B2 595 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 C4orf50Q6ZRC1 276 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 TTC7BQ86TV6 843 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 DCLK2Q8N568 766 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
UBE3D-201ENST00000237186 PIWIL2Q8TC59 973 aaKnown RBP16.51■□□□□ 0.23
UBE3D-201ENST00000237186 RNF34Q969K3 372 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 KIFC1Q9BW19 673 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 MMADHCQ9H3L0 296 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-201ENST00000237186 TAS2R1Q9NYW7 299 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 COPG2Q9UBF2 871 aa16.51■□□□□ 0.23
UBE3D-201ENST00000237186 CCDC195A0A1B0GUA6 201 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 MPOP05164 745 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 SERPINA6P08185 405 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 GM2AP17900 193 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 CACNB2Q08289 660 aaPredicted RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 PAN2Q504Q3 1202 aaKnown RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 PPM1JQ5JR12 505 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 TLDC1Q6P9B6 456 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 STRA8Q7Z7C7 330 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 ARHGAP12Q8IWW6 846 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 PPP1R14CQ8TAE6 165 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 FCRL5Q96RD9 977 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 DENND2DQ9H6A0 471 aaPredicted RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 SNX15Q9NRS6 342 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 PCDHB8Q9UN66 801 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 C15orf41Q9Y2V0 281 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 AAR2Q9Y312 384 aaKnown RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 TIMM44O43615 452 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 CCR1P32246 355 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 HADHAP40939 763 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 SLC1A6P48664 564 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 CSRP3P50461 194 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 RPL10AP62906 217 aaKnown RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 NRG1Q02297 640 aaPredicted RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 ACCSLQ4AC99 568 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 ZCCHC23Q6ZST2 131 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 CLEC14AQ86T13 490 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
UBE3D-201ENST00000237186 MFSD3Q96ES6 412 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 ANKRD27Q96NW4 1050 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 IL12RB2Q99665 862 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 FAM96AQ9H5X1 160 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 IL1RAPL1Q9NZN1 696 aa16.5■□□□□ 0.23
UBE3D-201ENST00000237186 VGLL3A8MV65 326 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 GYG2O15488 501 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 PAGE1O75459 146 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 LMNAP02545 664 aaKnown RBP16.49■□□□□ 0.23
UBE3D-201ENST00000237186 HARS2P49590 506 aaKnown RBP16.49■□□□□ 0.23
UBE3D-201ENST00000237186 SLC5A3P53794 718 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 TRIM32Q13049 653 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 HSP90AA5PQ58FG0 334 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 BTBD8Q5XKL5 378 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 SPATA2LQ8IUW3 424 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-201ENST00000237186 LRRC49Q8IUZ0 686 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 CELF6Q96J87 481 aaKnown RBP16.49■□□□□ 0.23
UBE3D-201ENST00000237186 PPP1R2P1Q96PQ5 205 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 AGAP2Q99490 1192 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 CCDC106Q9BWC9 280 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 CATSPERBQ9H7T0 1116 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 CHRAC1Q9NRG0 131 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 NSMCE4AQ9NXX6 385 aa16.49■□□□□ 0.23
UBE3D-201ENST00000237186 MATN3O15232 486 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ITM2AO43736 263 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ATP9BO43861 1147 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 MAFKO60675 156 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ITGB1P05556 798 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ALOX15P16050 662 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 GNAZP19086 355 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 KCNA4P22459 653 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 IRX4P78413 519 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms