RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IL31Q6EBC2 164 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 PHTF2Q8N3S3 785 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 RASGEF1CQ8N431 466 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 ARHGEF2Q92974 986 aaKnown RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 FAM118BQ9BPY3 351 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 MAGEH1Q9H213 219 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 FBRSL1Q9HCM7 1045 aaKnown RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 KIAA1549LQ6ZVL6 1849 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 CES2O00748 559 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 GALK1P51570 392 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 MLF2Q15773 248 aaPredicted RBP27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 PLEKHG6Q3KR16 790 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 PARP15Q460N3 678 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 PITRM1Q5JRX3 1037 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 ZNF783Q6ZMS7 281 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 SFTPA1Q8IWL2 248 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 UBALD2Q8IYN6 164 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 P3H4Q92791 437 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 ATP13A1Q9HD20 1204 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 ARHGEF3Q9NR81 526 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 INTS6Q9UL03 887 aaKnown RBP27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 SLC27A6Q9Y2P4 619 aa27.91■■■□□ 2.06
CHMP4B-201ENST00000217402 APOC4-APOC2K7ER74 178 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 APOC2P02655 101 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 PAPOLAP51003 745 aaKnown RBP27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 YBEYP58557 167 aaPredicted RBP27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 PON2Q15165 354 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 AHI1Q8N157 1196 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 TERB1Q8NA31 727 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 ALG14Q96F25 216 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 OR51B4Q9Y5P0 310 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 MIA3Q5JRA6 1907 aa27.9■■■□□ 2.06
CHMP4B-201ENST00000217402 ARHGAP42A6NI28 874 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 PGRMC1O00264 195 aaKnown RBP27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 KAT7O95251 611 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 GLULP15104 373 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 SLC12A1Q13621 1099 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 ARHGAP36Q6ZRI8 547 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 KIF18AQ8NI77 898 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 LRRN4Q8WUT4 740 aa27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 R3HDM2Q9Y2K5 976 aaKnown RBP27.89■■■□□ 2.06
CHMP4B-201ENST00000217402 TBC1D3BA6NDS4 549 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 CBX4O00257 560 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 CD72P21854 359 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 GLDCP23378 1020 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 ETFBP38117 255 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 OTUD4Q01804 1114 aaKnown RBP27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 TMEM215Q68D42 235 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 ADIPOR2Q86V24 386 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 ACTL9Q8TC94 416 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 CIPCQ9C0C6 399 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 WNT16Q9UBV4 365 aa27.89■■■□□ 2.05
CHMP4B-201ENST00000217402 PRRT4C9JH25 899 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 SNAP91O60641 907 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 URI1O94763 535 aaPredicted RBP27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 APODP05090 189 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 NR2C2P49116 596 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 GALNT2Q10471 571 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 SERINC3Q13530 473 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 PREPLQ4J6C6 727 aaPredicted RBP27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 MBLAC2Q68D91 279 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 KIAA0907Q7Z7F0 614 aaPredicted RBP27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 ATPAF2Q8N5M1 289 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 ACTRT1Q8TDG2 376 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 WFIKKN2Q8TEU8 576 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 FAM3CQ92520 227 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 MSANTD3Q96H12 275 aa27.88■■■□□ 2.05
CHMP4B-201ENST00000217402 SHISA7A6NL88 538 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 GRIA2P42262 883 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 PLK1P53350 603 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 B4GALNT4Q76KP1 1039 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 CREG2Q8IUH2 290 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 SIX5Q8N196 739 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 DCAF4L2Q8NA75 395 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 ATG4AQ8WYN0 398 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 OLFM3Q96PB7 478 aa27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 TTC7AQ9ULT0 858 aaPredicted RBP27.87■■■□□ 2.05
CHMP4B-201ENST00000217402 KRBA1A5PL33 1030 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 POLR2EP19388 210 aaKnown RBP27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 GARSP41250 739 aaKnown RBP27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 DMC1Q14565 340 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 LEKR1Q6ZMV7 388 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 ZC3H18Q86VM9 953 aaKnown RBP27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 CCNYQ8ND76 341 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 SORCS1Q8WY21 1168 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 EXOC4Q96A65 974 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 NAP1L3Q99457 506 aaPredicted RBP27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 C2orf49Q9BVC5 232 aaPredicted RBP27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 ACE2Q9BYF1 805 aaPredicted RBP27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 VPS51Q9UID3 782 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 HPCAL4Q9UM19 191 aa27.86■■■□□ 2.05
CHMP4B-201ENST00000217402 MX2P20592 715 aa27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 CTSOP43234 321 aaPredicted RBP27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 PRKCQQ04759 706 aa27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 NOMO1Q15155 1222 aa27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 SIX1Q15475 284 aaPredicted RBP27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 TMEM196Q5HYL7 178 aa27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 BZW1Q7L1Q6 419 aaKnown RBP27.85■■■□□ 2.05
CHMP4B-201ENST00000217402 SUGP1Q8IWZ8 645 aaKnown RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms