RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RNF19BQ6ZMZ0 732 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 TMEM135Q86UB9 458 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 GPR152Q8TDT2 470 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 SRPK1Q96SB4 655 aaKnown RBP30.34■■■□□ 2.45
PABPN1-201ENST00000216727 SLCO1B3Q9NPD5 702 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 SLC27A5Q9Y2P5 690 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 RPS6KL1Q9Y6S9 549 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 NT5C1B-RDH14C9J2C7 533 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 USP12O75317 370 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 MGAT5Q09328 741 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 BMPR2Q13873 1038 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 MGAT5BQ3V5L5 792 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 TIGD7Q6NT04 549 aaPredicted RBP30.34■■■□□ 2.45
PABPN1-201ENST00000216727 TMEM173Q86WV6 379 aaPredicted RBP30.34■■■□□ 2.45
PABPN1-201ENST00000216727 DNAAF3Q8N9W5 541 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 CRISPLD1Q9H336 500 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 C12orf65Q9H3J6 166 aaKnown RBP30.34■■■□□ 2.45
PABPN1-201ENST00000216727 NDFIP2Q9NV92 336 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 KLHL14Q9P2G3 628 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 SCN5AQ14524 2016 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 FNDC1Q4ZHG4 1894 aaPredicted RBP30.33■■■□□ 2.45
PABPN1-201ENST00000216727 MAGEB16A2A368 324 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 DNAJB2P25686 324 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 SPRED3Q2MJR0 410 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 RNF43Q68DV7 783 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 NAPEPLDQ6IQ20 393 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 ZNF683Q8IZ20 524 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 FAM111AQ96PZ2 611 aa30.33■■■□□ 2.45
PABPN1-201ENST00000216727 IQCGQ9H095 443 aaKnown RBP30.33■■■□□ 2.45
PABPN1-201ENST00000216727 PPARGC1AQ9UBK2 798 aaKnown RBP30.33■■■□□ 2.45
PABPN1-201ENST00000216727 AAR2Q9Y312 384 aaKnown RBP30.33■■■□□ 2.45
PABPN1-201ENST00000216727 SOAT2O75908 522 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 EFEMP1Q12805 493 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 TAF10Q12962 218 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 TRIP4Q15650 581 aaPredicted RBP30.32■■■□□ 2.44
PABPN1-201ENST00000216727 MROH9Q5TGP6 573 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 LINC00523Q86TU6 105 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 CERS2Q96G23 380 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 FCRL5Q96RD9 977 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 SEPT5Q99719 369 aaPredicted RBP30.32■■■□□ 2.44
PABPN1-201ENST00000216727 PLLPQ9Y342 182 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 USP1O94782 785 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 PBX3P40426 434 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 RPL10AP62906 217 aaKnown RBP30.32■■■□□ 2.44
PABPN1-201ENST00000216727 PACS1Q6VY07 963 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 ATP6V0D2Q8N8Y2 350 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 CCDC63Q8NA47 563 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 PPP1R2P1Q96PQ5 205 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 IL22Q9GZX6 179 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 RASSF4Q9H2L5 321 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 PRDM5Q9NQX1 630 aaPredicted RBP30.32■■■□□ 2.44
PABPN1-201ENST00000216727 DONSONQ9NYP3 566 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 MPP6Q9NZW5 540 aa30.32■■■□□ 2.44
PABPN1-201ENST00000216727 GSTA1P08263 222 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 CCL23P55773 120 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 CDHR3Q6ZTQ4 885 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 TAS1R1Q7RTX1 841 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 BCL7CQ8WUZ0 217 aaPredicted RBP30.31■■■□□ 2.44
PABPN1-201ENST00000216727 BTN2A3PQ96KV6 586 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 MANSC1Q9H8J5 431 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 ABCF3Q9NUQ8 709 aa30.31■■■□□ 2.44
PABPN1-201ENST00000216727 FAM237BA0A1B0GVD1 139 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 EFEMP2O95967 443 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 CDH17Q12864 832 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 MS4A13Q5J8X5 152 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 ACBD5Q5T8D3 534 aaPredicted RBP30.3■■■□□ 2.44
PABPN1-201ENST00000216727 OTOP3Q7RTS5 596 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 UMODL1-AS1Q8N2C9 162 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 GBP7Q8N8V2 638 aaPredicted RBP30.3■■■□□ 2.44
PABPN1-201ENST00000216727 FCRL3Q96P31 734 aaPredicted RBP30.3■■■□□ 2.44
PABPN1-201ENST00000216727 RNF208Q9H0X6 261 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 HAUS2Q9NVX0 235 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 GREB1Q4ZG55 1949 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 MYCP01106 439 aaPredicted RBP30.3■■■□□ 2.44
PABPN1-201ENST00000216727 ZDHHC11BP0C7U3 371 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 RHOQP17081 205 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 SCTRP47872 440 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 DUSP4Q13115 394 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 RASIP1Q5U651 963 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 MICALL1Q8N3F8 863 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 ACMSDQ8TDX5 336 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 USP33Q8TEY7 942 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 GLOD4Q9HC38 313 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 MARCH2Q9P0N8 246 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 ZFATQ9P243 1243 aa30.3■■■□□ 2.44
PABPN1-201ENST00000216727 IGLV3-10A0A075B6K4 115 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 WDR91A4D1P6 747 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 ANXA9O76027 345 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 IGLV3-27P01718 113 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 CCL5P13501 91 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 CRHR1P34998 444 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 NDST2P52849 883 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 SLC39A5Q6ZMH5 540 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 SERBP1Q8NC51 408 aaKnown RBP eCLIP30.29■■■□□ 2.449e-7■■■□□ 15
PABPN1-201ENST00000216727 CEP295NLQ96MC4 621 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 ZYG11BQ9C0D3 744 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 ZCWPW2A0A1B0GU75 182 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 TBX18O95935 607 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 SERPINB4P48594 390 aa30.29■■■□□ 2.44
PABPN1-201ENST00000216727 PAPOLAP51003 745 aaKnown RBP30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms