RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GPR65Q8IYL9 337 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 LRRC34Q8IZ02 419 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 C4orf33Q8N1A6 199 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 PPM1NQ8N819 430 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 ZNF461Q8TAF7 563 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MGARPQ8TDB4 240 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 OXNAD1Q96HP4 312 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MYRFLQ96LU7 910 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 AGAP3Q96P47 875 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 FAM107BQ9H098 131 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 C11orf49Q9H6J7 331 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 RETREG1Q9H6L5 497 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 NOL6Q9H6R4 1146 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SLC12A8A0AV02 714 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MAGEB16A2A368 324 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 TLR5O60602 858 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SPAG7O75391 227 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 PIAS1O75925 651 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 TBX18O95935 607 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 LAG3P18627 525 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 CA4P22748 312 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 CNTFP26441 200 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SESN2P58004 480 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 C5orf22Q49AR2 442 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SPANXN3Q5MJ09 141 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 NAPEPLDQ6IQ20 393 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 TRMT10BQ6PF06 316 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 C6orf89Q6UWU4 347 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MARK2Q7KZI7 788 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 YTHDF3Q7Z739 585 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 LINC00523Q86TU6 105 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 CTAGE3PQ8IX95 158 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 SEC16BQ96JE7 1060 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 NDFIP2Q9NV92 336 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 BFARQ9NZS9 450 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MPP6Q9NZW5 540 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 ZNF212Q9UDV6 495 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 MAFFQ9ULX9 164 aa14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 AAR2Q9Y312 384 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-201ENST00000023939 F5H423 210 aaPredicted RBP14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 KRT38O76015 456 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 ANXA9O76027 345 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 RPA3P35244 121 aaPredicted RBP14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 TNK2Q07912 1038 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 NIPAL4Q0D2K0 466 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 DNAJC3Q13217 504 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 CRYMQ14894 314 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 LRRC26Q2I0M4 334 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 ANO4Q32M45 955 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 ARMC3Q5W041 872 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 TIFABQ6ZNK6 161 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 ARHGAP36Q6ZRI8 547 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 DDX53Q86TM3 631 aaKnown RBP14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 TMEM135Q86UB9 458 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 OR52K1Q8NGK4 314 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 GIPC2Q8TF65 315 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 GLOD4Q9HC38 313 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 SYBUQ9NX95 663 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 MKS1Q9NXB0 559 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 VANGL2Q9ULK5 521 aa14.62□□□□□ -0.07
RTFDC1-201ENST00000023939 ZNF840PA6NDX5 716 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 POLBP06746 335 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 VIMP08670 466 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CSH1P0DML2 217 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CSH2P0DML3 217 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 HMGA1P17096 107 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 RPL17P18621 184 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 PAPOLAP51003 745 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 RAB33AQ14088 237 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 PDK4Q16654 411 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 FBXL22Q6P050 247 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CASC4Q6P4E1 433 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 MIB1Q86YT6 1006 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CCDC117Q8IWD4 279 aaPredicted RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CDKL2Q92772 493 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TRMT2BQ96GJ1 504 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TMEM169Q96HH4 297 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CCSER2Q9H7U1 834 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 SPG21Q9NZD8 308 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 SAMD15Q9P1V8 674 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 DNMT3LQ9UJW3 386 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 FAM237BA0A1B0GVD1 139 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 USP1O94782 785 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 BAIAP3O94812 1187 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 SEC24AO95486 1093 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 PEX11BO96011 259 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TAC1P20366 129 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 ATP5C1P36542 298 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 CCNFP41002 786 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 MAPKAPK2P49137 400 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 NEK3P51956 506 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 WDR5P61964 334 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 MGAT5Q09328 741 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 HNRNPDQ14103 355 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 ITIH4Q14624 930 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 SLC1A5Q15758 541 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TAX1BP1Q86VP1 789 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms