RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Xpnpep3B7ZMP1 506 aaKnown RBP11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Smok3aC0HKC8 504 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Smok3bC0HKC9 504 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Hsd17b14E9Q3D4 273 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Hmgxb3G3X9M3 1254 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 1700122O11RikJ3QPW6 241 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pik3r2O08908 722 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zfp956Q3UZY6 572 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Clhc1Q5M6W3 596 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ppp1r14bQ62084 147 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tmem154Q8C4Q9 181 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Klhl2Q8JZP3 593 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Wdr11Q8K1X1 1223 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mast2Q60592 1734 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ccdc88aQ5SNZ0 1873 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm16430A6X8J1 155 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dusp8O09112 663 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tnfrsf18O35714 228 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 CrymO54983 313 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Shoc2O88520 582 aaKnown RBP11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 TubP50586 505 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr798Q7TRH8 311 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fbxl5Q8C2S5 690 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Strip2Q8C9H6 844 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Oit3Q8R4V5 546 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 TgdsQ8VDR7 355 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dok4Q99KE3 325 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Trpd52l3Q9CQ14 231 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Snx2Q9CWK8 519 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slxl1Q9D515 155 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Aff4Q9ESC8 1160 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tk2Q9R088 270 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Plce1Q8K4S1 2282 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Wdr95D3Z7A8 784 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cyp2c37P56654 490 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Patl1Q3TC46 770 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Msi1Q61474 362 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Prl3a1Q78Y73 227 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ccdc17Q8CE13 565 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tp53inp2Q8CFU8 221 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Vmn1r214Q8R279 367 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 MtrexQ9CZU3 1040 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ccdc103Q9D9P2 237 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Stx12Q9ER00 274 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sh3glb1Q9JK48 365 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tbk1Q9WUN2 729 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mapk13Q9Z1B7 366 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mcf2A2AEU1 1111 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Map7d3A2AEY4 876 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dcpp3L7N259 170 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 EgfP01132 1217 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 PdgfraP26618 1089 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 MylpfP97457 169 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Micall2Q3TN34 1009 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Soat1Q61263 540 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Has1Q61647 583 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Itih3Q61704 889 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Arhgap20Q6IFT4 1182 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mtmr10Q7TPM9 771 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 MogsQ80UM7 834 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc9a4Q8BUE1 797 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Klrb1fQ8VD98 217 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cpt1bQ924X2 772 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ier5lQ99J55 406 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Actr3Q99JY9 418 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Lyrm1Q9CQB7 122 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Oma1Q9D8H7 521 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Lilra5D3Z7A9 295 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm2237E9Q501 211 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm3591K7N6X2 186 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Samd11Q1RNF8 542 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Aarsd1Q3THG9 412 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Armcx5Q3UZB0 606 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mapre1Q61166 268 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Smarcd1Q61466 515 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc26a2Q62273 739 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Klhl17Q6TDP3 640 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rbm12b1Q80YR9 836 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Elmo2Q8BHL5 732 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Panx3Q8CEG0 392 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rnf208Q8K0W3 265 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mgat5Q8R4G6 740 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Kiaa2013Q91X21 634 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pcdha2Q91Y17 948 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ak5Q920P5 562 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Map4k3Q99JP0 894 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Abtb1Q99LJ2 478 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fam227bQ9D518 532 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 PrccQ9EQC8 491 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Wnt8bQ9WUD6 350 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ror1Q9Z139 937 aa11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 VarsQ9Z1Q9 1263 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Myo18aQ9JMH9 2050 aaKnown RBP11.07□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ccdc194A0A140LIT1 234 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr271-ps1A0A1L1SQH2 283 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ptchd4B9EKX1 904 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rad51ap2G3UW63 976 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Kng1O08677 661 aa11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ercc2O08811 760 aaKnown RBP11.06□□□□□ -0.64
Msh3-201ENSMUST00000022220 Kifc3O35231 824 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms