RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 LIMD1Q9UGP4 676 aa17.94■□□□□ 0.46
PHGDH-230ENST00000641927 RAMP2O60895 175 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 CYP17A1P05093 508 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 ADH5P11766 374 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 TYRP14679 529 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 NUMBP49757 651 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 EIF3EP60228 445 aaKnown RBP17.93■□□□□ 0.46
PHGDH-230ENST00000641927 TP53INP2Q8IXH6 220 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 KLHL7Q8IXQ5 586 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 RETREG1Q9H6L5 497 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 ZNF212Q9UDV6 495 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 DOCK4Q8N1I0 1966 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 H7C0C1 242 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 PHF2O75151 1096 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 ATP5OP48047 213 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 NDST2P52849 883 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 GAD2Q05329 585 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 POLD3Q15054 466 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-230ENST00000641927 NOMO1Q15155 1222 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 CCNG2Q16589 344 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 B4GALNT4Q76KP1 1039 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 UMODL1-AS1Q8N2C9 162 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 NAT16Q8N8M0 369 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 CCNYQ8ND76 341 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 TTC8Q8TAM2 541 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 LRRN4Q8WUT4 740 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 SLC39A8Q9C0K1 460 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 KLC2Q9H0B6 622 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 DDX47Q9H0S4 455 aaKnown RBP17.93■□□□□ 0.46
PHGDH-230ENST00000641927 BRD9Q9H8M2 597 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 DNPEPQ9ULA0 475 aa17.93■□□□□ 0.46
PHGDH-230ENST00000641927 CCDC188H7C350 402 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 CHADO15335 359 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 LIASO43766 372 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 PENKP01210 267 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-230ENST00000641927 RBP3P10745 1247 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 NR1H3Q13133 447 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 BYSLQ13895 437 aaKnown RBP17.92■□□□□ 0.46
PHGDH-230ENST00000641927 PDK1Q15118 436 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 AAK1Q2M2I8 961 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 FSCBQ5H9T9 825 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 ZNF572Q7Z3I7 529 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-230ENST00000641927 SETD3Q86TU7 594 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-230ENST00000641927 CPA6Q8N4T0 437 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 CCDC114Q96M63 670 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 FRMD8P1Q9BZ68 369 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-230ENST00000641927 MUC3BQ9H195 1237 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 ECT2Q9H8V3 914 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 KCNK12Q9HB15 430 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 HPS4Q9NQG7 708 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 GTSE1Q9NYZ3 720 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 TBC1D30Q9Y2I9 924 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 COL6A3P12111 3177 aa17.92■□□□□ 0.46
PHGDH-230ENST00000641927 A0A0D9SEW6 157 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 RASA4BC9J798 803 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 PPP1R12AO14974 1030 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-230ENST00000641927 RASA4O43374 803 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 MX2P20592 715 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 PAPOLAP51003 745 aaKnown RBP17.91■□□□□ 0.46
PHGDH-230ENST00000641927 GNA12Q03113 381 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 RUNX3Q13761 415 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 RNF219Q5W0B1 726 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-230ENST00000641927 CXorf57Q6NSI4 855 aaKnown RBP17.91■□□□□ 0.46
PHGDH-230ENST00000641927 DARS2Q6PI48 645 aaKnown RBP17.91■□□□□ 0.46
PHGDH-230ENST00000641927 ARHGAP12Q8IWW6 846 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 ATPAF2Q8N5M1 289 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 OR52K2Q8NGK3 314 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 WFDC5Q8TCV5 224 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 HMCESQ96FZ2 354 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 KRT12Q99456 494 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 LGMNQ99538 433 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 SPON2Q9BUD6 331 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 NOL6Q9H6R4 1146 aaKnown RBP17.91■□□□□ 0.46
PHGDH-230ENST00000641927 LRRC19Q9H756 370 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 C10orf88Q9H8K7 445 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 MARK1Q9P0L2 795 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 THEGQ9P2T0 379 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 CLEC4EQ9ULY5 219 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 ZNF148Q9UQR1 794 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 RAD54BQ9Y620 910 aa17.91■□□□□ 0.46
PHGDH-230ENST00000641927 OTOL1A6NHN0 477 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 ARHGAP42A6NI28 874 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 NCAM2O15394 837 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 ASGR2P07307 311 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 GARSP41250 739 aaKnown RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 KCNJ1P48048 391 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 YBEYP58557 167 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 GALNT2Q10471 571 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 AP1B1Q10567 949 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 CYP1B1Q16678 543 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 PARP15Q460N3 678 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 IL31Q6EBC2 164 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 CCDC105Q8IYK2 499 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 OR7D4Q8NG98 312 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 SLC35B2Q8TB61 432 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 OLFM3Q96PB7 478 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 XPO6Q96QU8 1125 aaKnown RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 MYOFQ9NZM1 2061 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 ILVBLA1L0T0 632 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms