RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 KLHDC10Q6PID8 442 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 C14orf80Q86SX3 495 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 ARHGAP12Q8IWW6 846 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 DPF3Q92784 378 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TRMT2BQ96GJ1 504 aaKnown RBP16.84■□□□□ 0.29
PHGDH-216ENST00000641375 SELENOSQ9BQE4 189 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 GBA3Q9H227 469 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 SSX2IPQ9Y2D8 614 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 YIPF1Q9Y548 306 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 SRRM3A6NNA2 597 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-216ENST00000641375 GJB5O95377 273 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 CPP00450 1065 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 FGBP02675 491 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 PPP3CCP48454 512 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 AFMIDQ63HM1 303 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 ZNF683Q8IZ20 524 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 DEPDC1BQ8WUY9 529 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 SIGLEC10Q96LC7 697 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TEKT5Q96M29 485 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
PHGDH-216ENST00000641375 NACA2Q9H009 215 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TMEM248Q9NWD8 314 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TRPM5Q9NZQ8 1165 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 MPP6Q9NZW5 540 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TCRBV9S1A1TA0A576 114 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 ZNF840PA6NDX5 716 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 PRRG1O14668 218 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 TRDMT1O14717 391 aaKnown RBP16.83■□□□□ 0.28
PHGDH-216ENST00000641375 HMGA1P17096 107 aaKnown RBP16.83■□□□□ 0.28
PHGDH-216ENST00000641375 LSP1P33241 339 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 NDST2P52849 883 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 TMED2Q15363 201 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 NLRP14Q86W24 1093 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 TCEAL8Q8IYN2 117 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 AGGF1Q8N302 714 aaeCLIP16.83■□□□□ 0.28
PHGDH-216ENST00000641375 MAML1Q92585 1016 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 CENPTQ96BT3 561 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 AGAP3Q96P47 875 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 EBNA1BP2Q99848 306 aaKnown RBP16.83■□□□□ 0.28
PHGDH-216ENST00000641375 SLC39A8Q9C0K1 460 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 SENP1Q9P0U3 644 aa16.83■□□□□ 0.28
PHGDH-216ENST00000641375 RASA4BC9J798 803 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 ZBTB24O43167 697 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-216ENST00000641375 RASA4O43374 803 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 HMBSP08397 361 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 CCNB1P14635 433 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 HTRA4P83105 476 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-216ENST00000641375 ZBTB17Q13105 803 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 CCNJLQ8IV13 435 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 CYP4X1Q8N118 509 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 UMODL1-AS1Q8N2C9 162 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 FIBCD1Q8N539 461 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 UXTQ9UBK9 157 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-216ENST00000641375 MAD1L1Q9Y6D9 718 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 ARHGAP42A6NI28 874 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 SDR42E2A6NKP2 422 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 F5H423 210 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-216ENST00000641375 MATN3O15232 486 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 MAFKO60675 156 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 FGF18O76093 207 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 AP2A1O95782 977 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 JCHAINP01591 159 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 DNAJB2P25686 324 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 MSH2P43246 934 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 FPGSQ05932 587 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 PRPSAP1Q14558 356 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 ADGRD1Q6QNK2 874 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 C16orf59Q7L2K0 433 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 ZSCAN18Q8TBC5 510 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-216ENST00000641375 PAFAH2Q99487 392 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 NAT9Q9BTE0 207 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 DHRS4Q9BTZ2 278 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 NDFIP2Q9NV92 336 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 INSL6Q9Y581 213 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 IKBKGQ9Y6K9 419 aa16.82■□□□□ 0.28
PHGDH-216ENST00000641375 NYNRINQ9P2P1 1898 aaKnown RBP16.81■□□□□ 0.28
PHGDH-216ENST00000641375 DRGXA6NNA5 263 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 SUN1O94901 812 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 CHN1P15882 459 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 CD68P34810 354 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-216ENST00000641375 GRIA1P42261 906 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 HARS2P49590 506 aaKnown RBP16.81■□□□□ 0.28
PHGDH-216ENST00000641375 EPHB3P54753 998 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 ANO4Q32M45 955 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 RAP1GAP2Q684P5 730 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 FBXL22Q6P050 247 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 SUGP1Q8IWZ8 645 aaKnown RBP16.81■□□□□ 0.28
PHGDH-216ENST00000641375 PPP1R2P1Q96PQ5 205 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 PRMT1Q99873 361 aaKnown RBP16.81■□□□□ 0.28
PHGDH-216ENST00000641375 ZBED2Q9BTP6 218 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 PSMD3O43242 534 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 KRT15P19012 456 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 UBE2Q1Q7Z7E8 422 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 CHSY1Q86X52 802 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 SRRM1Q8IYB3 904 aaKnown RBP16.81■□□□□ 0.28
PHGDH-216ENST00000641375 GSDMBQ8TAX9 411 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 AUTS2Q8WXX7 1259 aa16.81■□□□□ 0.28
PHGDH-216ENST00000641375 RPRD1AQ96P16 312 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms