RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	NDFIP2	Q9NV92	336 aa		27.45	■■□□□ 1.98
VEGFA-231	ENST00000640499	GPATCH2L	Q9NWQ4	482 aa		27.45	■■□□□ 1.98
VEGFA-231	ENST00000640499	SLCO3A1	Q9UIG8	710 aa		27.45	■■□□□ 1.98
VEGFA-231	ENST00000640499	PLA2G4C	Q9UP65	541 aa		27.45	■■□□□ 1.98
VEGFA-231	ENST00000640499	AKR1B10	O60218	316 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	LRCH4	O75427	683 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	ATP5B	P06576	529 aa	Known RBP	27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	TCF4	P15884	667 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	MIP	P30301	263 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	L1CAM	P32004	1257 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	CA9	Q16790	459 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	RNF219	Q5W0B1	726 aa	Predicted RBP	27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	SERPINA13P	Q6UXR4	307 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	FRMD1	Q8N878	549 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	GAB3	Q8WWW8	586 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	NKD2	Q969F2	451 aa	Predicted RBP	27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	CCDC42	Q96M95	316 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	SEMA4A	Q9H3S1	761 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	PCSK1N	Q9UHG2	260 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499	INVS	Q9Y283	1065 aa		27.44	■■□□□ 1.98
VEGFA-231	ENST00000640499		A0A0D9SEW6	157 aa		27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	PRR23A	A6NEV1	266 aa		27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	DCLK1	O15075	740 aa		27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	NDUFV2	P19404	249 aa		27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	CNR2	P34972	360 aa		27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	FNDC3B	Q53EP0	1204 aa	Known RBP	27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	RPL10L	Q96L21	214 aa	Known RBP	27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	MKRN2	Q9H000	416 aa	Known RBP	27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	DEF6	Q9H4E7	631 aa		27.43	■■□□□ 1.98
VEGFA-231	ENST00000640499	WDR87	Q6ZQQ6	2873 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	ALDH1A2	O94788	518 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	ASL	P04424	464 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	EPHX1	P07099	455 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	IL1R2	P27930	398 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	STK19	P49842	368 aa	Predicted RBP	27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	COPA	P53621	1224 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	AIF1	P55008	147 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	OXCT1	P55809	520 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	ECT2L	Q008S8	904 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	CAMK2G	Q13555	558 aa	Predicted RBP	27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	SETD3	Q86TU7	594 aa	Predicted RBP	27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	CPNE8	Q86YQ8	564 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	RLN3	Q8WXF3	142 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	MRGPRX1	Q96LB2	322 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	PRSS16	Q9NQE7	514 aa		27.42	■■□□□ 1.98
VEGFA-231	ENST00000640499	CHD5	Q8TDI0	1954 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	RPP40	O75818	363 aa	Known RBP	27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	MOCS3	O95396	460 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	RHOC	P08134	193 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	SRPRA	P08240	638 aa	Known RBP	27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	H2AFZ	P0C0S5	128 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	C7	P10643	843 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	FECH	P22830	423 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	OR1E1	P30953	314 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	MAP7D1	Q3KQU3	841 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	EFHC2	Q5JST6	749 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	H2AFV	Q71UI9	128 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	NIPA2	Q8N8Q9	360 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	ANP32E	Q9BTT0	268 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	SNRNP25	Q9BV90	132 aa	Known RBP	27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	CD93	Q9NPY3	652 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	ANAPC7	Q9UJX3	599 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	FRYL	O94915	3013 aa		27.41	■■□□□ 1.98
VEGFA-231	ENST00000640499	TTC34	A8MYJ7	566 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	LMNA	P02545	664 aa	Known RBP	27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	TMEM253	P0C7T8	217 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	RHOQ	P17081	205 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	PCK1	P35558	622 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	MRE11	P49959	708 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	SIM2	Q14190	667 aa	Predicted RBP	27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	E2F5	Q15329	346 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	LPAL2	Q16609	132 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	TXNRD3NB	Q6F5E7	133 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	RWDD4	Q6NW29	188 aa	Known RBP	27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	ALYREF	Q86V81	257 aa	Known RBP	27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	KDM1B	Q8NB78	822 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	OR7D4	Q8NG98	312 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	TBC1D31	Q96DN5	1066 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	TMEM248	Q9NWD8	314 aa		27.4	■■□□□ 1.98
VEGFA-231	ENST00000640499	SNAP91	O60641	907 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	RNF8	O76064	485 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	BCKDHB	P21953	392 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	GLDC	P23378	1020 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	P2RY2	P41231	377 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	ACAP1	Q15027	740 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	C6orf118	Q5T5N4	469 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	ERMARD	Q5T6L9	678 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	KBTBD6	Q86V97	674 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	ABCA7	Q8IZY2	2146 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	FAM160A2	Q8N612	972 aa	Predicted RBP	27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	ZNF564	Q8TBZ8	553 aa	Predicted RBP	27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	PANX2	Q96RD6	677 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	NOL6	Q9H6R4	1146 aa	Known RBP	27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	OSGEP	Q9NPF4	335 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	BCCIP	Q9P287	314 aa	Known RBP eCLIP	27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	MBD1	Q9UIS9	605 aa	Predicted RBP	27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	VPS28	Q9UK41	221 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	USP18	Q9UMW8	372 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	AP4E1	Q9UPM8	1137 aa		27.39	■■□□□ 1.98
VEGFA-231	ENST00000640499	SMG5	Q9UPR3	1016 aa	Known RBP	27.39	■■□□□ 1.98

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