RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CTSOP43234 321 aaPredicted RBP13.56□□□□□ -0.24
GTF3A-209ENST00000640289 RPS9P46781 194 aaKnown RBP13.56□□□□□ -0.24
GTF3A-209ENST00000640289 MARCKSL1P49006 195 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 DPYSL3Q14195 570 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 FBXO43Q4G163 708 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 EGFLAMQ63HQ2 1017 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 NUDT18Q6ZVK8 323 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 SETD3Q86TU7 594 aaPredicted RBP13.56□□□□□ -0.24
GTF3A-209ENST00000640289 RHOT1Q8IXI2 618 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ZNF513Q8N8E2 541 aaPredicted RBP13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ZNF557Q8N988 423 aaPredicted RBP13.56□□□□□ -0.24
GTF3A-209ENST00000640289 KCTD6Q8NC69 237 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 OR7D4Q8NG98 312 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 WFIKKN2Q8TEU8 576 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 USP33Q8TEY7 942 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 CYB5D2Q8WUJ1 264 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 RAPGEF5Q92565 580 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 TSC1Q92574 1164 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ALG14Q96F25 216 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
GTF3A-209ENST00000640289 CSPG4P5Q96PW8 444 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ACOX2Q99424 681 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 CHRDQ9H2X0 955 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 C2orf42Q9NWW7 574 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 MFHAS1Q9Y4C4 1052 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 OR51B4Q9Y5P0 310 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 A0A0C4DFX4 3053 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 WASH4PA8MWX3 477 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 H3BRJ5 948 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 FGF10O15520 208 aaPredicted RBP13.55□□□□□ -0.24
GTF3A-209ENST00000640289 FTCDO95954 541 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 KRT1P04264 644 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 AMPD1P23109 780 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 KDELR1P24390 212 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 IL4RP24394 825 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 AVPR2P30518 371 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 HTR7P34969 479 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 HCAR3P49019 387 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 MAPKAPK2P49137 400 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 DPYSQ14117 519 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 IFI16Q16666 785 aaKnown RBP13.55□□□□□ -0.24
GTF3A-209ENST00000640289 LRRC38Q5VT99 294 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 SYNPOQ8N3V7 929 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 CCDC33Q8N5R6 958 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
GTF3A-209ENST00000640289 ALLCQ8N6M5 410 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
GTF3A-209ENST00000640289 IL17RCQ8NAC3 791 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 NETO2Q8NC67 525 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 KIAA1524Q8TCG1 905 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 KRT35Q92764 455 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 PSMB7Q99436 277 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 FEM1AQ9BSK4 669 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 LRFN3Q9BTN0 628 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 CALN1Q9BXU9 219 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 MUC3BQ9H195 1237 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 ETNK2Q9NVF9 386 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 VPS28Q9UK41 221 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 PYCARDQ9ULZ3 195 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 PACSIN2Q9UNF0 486 aaPredicted RBP13.55□□□□□ -0.24
GTF3A-209ENST00000640289 STARD13Q9Y3M8 1113 aa13.55□□□□□ -0.24
GTF3A-209ENST00000640289 ILVBLA1L0T0 632 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 LRRD1A4D1F6 860 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 DCLK1O15075 740 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 SNAP91O60641 907 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 KLF8O95600 359 aaPredicted RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 POLR2EP19388 210 aaKnown RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 GLDCP23378 1020 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 ACVRL1P37023 503 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 WASP42768 502 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 PLK1P53350 603 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 MRPS21P82921 87 aaKnown RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 GNA12Q03113 381 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 MTAPQ13126 283 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 SLC12A1Q13621 1099 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 DMC1Q14565 340 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 EIF4HQ15056 248 aaKnown RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 PDK2Q15119 407 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 PTPRNQ16849 979 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 ZNF662Q6ZS27 426 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 NT5DC3Q86UY8 548 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 REXO1L1PQ8IX06 675 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 NPWQ8N729 165 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 TXNDC5Q8NBS9 432 aaKnown RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 TTC17Q96AE7 1141 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 RNF25Q96BH1 459 aaPredicted RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 ERLEC1Q96DZ1 483 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 CELF6Q96J87 481 aaKnown RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 KLC2Q9H0B6 622 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 RETREG1Q9H6L5 497 aa13.54□□□□□ -0.24
GTF3A-209ENST00000640289 NOL6Q9H6R4 1146 aaKnown RBP13.54□□□□□ -0.24
GTF3A-209ENST00000640289 TRMT1Q9NXH9 659 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms