RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SMAD3P84022 425 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 OGDHQ02218 1023 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 MESDQ14696 234 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 PM20D1Q6GTS8 502 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TRNP1Q6NT89 227 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ZCCHC8Q6NZY4 707 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 LILRA6Q6PI73 481 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ADAMTSL4Q6UY14 1074 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ARCQ7LC44 396 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 BHLHA9Q7RTU4 235 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 DAAM2Q86T65 1068 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 NUP93Q8N1F7 819 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SCML4Q8N228 414 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 EMC1Q8N766 993 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 STKLD1Q8NE28 680 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 FNIP1Q8TF40 1166 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ARNTL2Q8WYA1 636 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SPATA17Q96L03 361 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CCDC138Q96M89 665 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CEP295NLQ96MC4 621 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CLEC4MQ9H2X3 399 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CYP4F11Q9HBI6 524 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 IL37Q9NZH6 218 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 DNAI1Q9UI46 699 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 MAFFQ9ULX9 164 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ATG2AQ2TAZ0 1938 aa8.27□□□□□ -1.08
SCARB2-220ENST00000640076 MYO16Q9Y6X6 1858 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 A0A1B0GVC2 190 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 C2CD4BA6NLJ0 364 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 YJEFN3A6XGL0 299 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 TMEM110-MUSTN1A8MSY1 372 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 E7ENQ6 273 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 PRRG1O14668 218 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 HSF2BPO75031 334 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 GRAP2O75791 330 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 PROSCO94903 275 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 FTCDO95954 541 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 B3GALT4O96024 378 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 GLI1P08151 1106 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 RARAP10276 462 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 KLRC2P26717 231 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 ELF1P32519 619 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 GRK6P43250 576 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
SCARB2-220ENST00000640076 RNASE9P60153 205 aaKnown RBP8.27□□□□□ -1.09
SCARB2-220ENST00000640076 YWHAZP63104 245 aaKnown RBP8.27□□□□□ -1.09
SCARB2-220ENST00000640076 EFHC1Q5JVL4 640 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 WDR45BQ5MNZ6 344 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 PGM2L1Q6PCE3 622 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 DENND5BQ6ZUT9 1274 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 SNX32Q86XE0 403 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 SYCE1Q8N0S2 351 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 NXPE1Q8N323 547 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 IRGQQ8WZA9 623 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 PTPRN2Q92932 1015 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 ASNSD1Q9NWL6 643 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 GPR52Q9Y2T5 361 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
SCARB2-220ENST00000640076 MTCL1Q9Y4B5 1905 aaKnown RBP8.27□□□□□ -1.09
SCARB2-220ENST00000640076 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 FAM92AA1XBS5 289 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 ERICH4A6NGS2 130 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 EPOPA6NHQ4 379 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 RTN3O95197 1032 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 SPATA31D3P0C874 917 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 MLLT1Q03111 559 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 CCINQ13939 588 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 SPATA31D4Q6ZUB0 917 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 HFE2Q6ZVN8 426 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 NT5DC3Q86UY8 548 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 CPNE8Q86YQ8 564 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 NIPA2Q8N8Q9 360 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 GDPD5Q8WTR4 605 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 RXFP2Q8WXD0 754 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 FAM149B1Q96BN6 582 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 SLC2A13Q96QE2 648 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 CNPY3Q9BT09 278 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 LGR4Q9BXB1 951 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 FBXO44Q9H4M3 255 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 EMC7Q9NPA0 242 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 RRAGDQ9NQL2 400 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 LCMT1Q9UIC8 334 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 FBXW11Q9UKB1 542 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 SCML2Q9UQR0 700 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 JRKLQ9Y4A0 524 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 HYOU1Q9Y4L1 999 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 INSL5Q9Y5Q6 135 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 ALG6Q9Y672 507 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 COL4A4P53420 1690 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 CTAGE9A4FU28 777 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 SLC38A8A6NNN8 435 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 AP1G1O43747 822 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA12O60330 932 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 LPXNO60711 386 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 DAB1O75553 588 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 GLUD1P00367 558 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 FYNP06241 537 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms