RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CPSF3Q9UKF6 684 aaKnown RBP7.7□□□□□ -1.18
NECAP1-220ENST00000639841 EXOC7Q9UPT5 735 aa7.7□□□□□ -1.18
NECAP1-220ENST00000639841 RWDD3Q9Y3V2 267 aa7.7□□□□□ -1.18
NECAP1-220ENST00000639841 KCNE2Q9Y6J6 123 aa7.7□□□□□ -1.18
NECAP1-220ENST00000639841 RPTORQ8N122 1335 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-220ENST00000639841 BTBD19C9JJ37 291 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 RIPK2O43353 540 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 LILRB5O75023 590 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 FRAT2O75474 233 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-220ENST00000639841 BCAS2O75934 225 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-220ENST00000639841 LRG1P02750 347 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 PROCP04070 461 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 CCDC175P0C221 793 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 CCL5P13501 91 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 PSMC4P43686 418 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 PCLAFQ15004 111 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 CEP55Q53EZ4 464 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 RABEPKQ7Z6M1 372 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 KRT23Q9C075 422 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 PRO3102Q9H379 93 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 SEMA6CQ9H3T2 930 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 TDRD3Q9H7E2 651 aaKnown RBP7.69□□□□□ -1.18
NECAP1-220ENST00000639841 PLEKHA2Q9HB19 425 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 DKK3Q9UBP4 350 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 MGAMO43451 1857 aa7.69□□□□□ -1.18
NECAP1-220ENST00000639841 MYH13Q9UKX3 1938 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 TCP10L2B9ZVM9 353 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 J3KTA2 159 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 AP3B1O00203 1094 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 CACNB4O00305 520 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 DNM1LO00429 736 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PEX12O00623 359 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 CD1AP06126 327 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 DDCP20711 480 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PCSK1P29120 753 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 IL15P40933 162 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 UCP3P55916 312 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 C21orf58P58505 322 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 YBX1P67809 324 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 CDK5R2Q13319 367 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ITGA7Q13683 1181 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 KCNAB1Q14722 419 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 FAM214BQ7L5A3 538 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 LPCAT2Q7L5N7 544 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 WFDC3Q8IUB2 231 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 SLC17A8Q8NDX2 589 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ZNF775Q96BV0 537 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 AMNQ9BXJ7 453 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 MYOTQ9UBF9 498 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 FETUBQ9UGM5 382 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ZC3H7BQ9UGR2 993 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ZDHHC8Q9ULC8 765 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PCDHGA5Q9Y5G8 931 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PCDHGA1Q9Y5H4 931 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 FRMD3A2A2Y4 597 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 OR2W5A6NFC9 320 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 A8MVJ9 347 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PDHXO00330 501 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 TSPAN4O14817 238 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 TAF5LO75529 589 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PALMO75781 387 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 UNC5CO95185 931 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PNPP00491 289 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ARP10275 920 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ECHS1P30084 290 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 SREBF1P36956 1147 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PBX3P40426 434 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 SH3BGRP55822 239 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 NOMO3P69849 1222 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 GRIN1Q05586 938 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 SLC29A2Q14542 456 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 C9orf152Q5JTZ5 239 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 TTC39AQ5SRH9 613 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 LIPMQ5VYY2 423 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 DGAT2L7PQ6IED9 249 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 TTI2Q6NXR4 508 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 CHST3Q7LGC8 479 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 DMRTC2Q8IXT2 367 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 PEX5LQ8IYB4 626 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 POC5Q8NA72 575 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 ANKRD20A12PQ8NF67 263 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 KIF18AQ8NI77 898 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 HERC2P3Q9BVR0 1158 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 STN1Q9H668 368 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 TASP1Q9H6P5 420 aa7.68□□□□□ -1.18
NECAP1-220ENST00000639841 MRPL44Q9H9J2 332 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 SIRT3Q9NTG7 399 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 CHCHD3Q9NX63 227 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 DDX43Q9NXZ2 648 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 HOOK1Q9UJC3 728 aaKnown RBP7.68□□□□□ -1.18
NECAP1-220ENST00000639841 DOCK2Q92608 1830 aa7.67□□□□□ -1.18
NECAP1-220ENST00000639841 GPR75-ASB3A0A0A6YYF3 556 aa7.67□□□□□ -1.18
NECAP1-220ENST00000639841 GLOD5A6NK44 160 aa7.67□□□□□ -1.18
NECAP1-220ENST00000639841 PGRMC2O15173 223 aa7.67□□□□□ -1.18
NECAP1-220ENST00000639841 LEFTY1O75610 366 aa7.67□□□□□ -1.18
NECAP1-220ENST00000639841 RPP40O75818 363 aaKnown RBP7.67□□□□□ -1.18
NECAP1-220ENST00000639841 PDHA1P08559 390 aa7.67□□□□□ -1.18
NECAP1-220ENST00000639841 SUPT20HL2P0C7V6 817 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms