RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CAMK4Q16566 473 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 EXOC3L4Q17RC7 722 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 TTC39BQ5VTQ0 682 aaPredicted RBP19.05■□□□□ 0.64
CLN6-220ENST00000637450 ADAT2Q7Z6V5 191 aaKnown RBP19.05■□□□□ 0.64
CLN6-220ENST00000637450 STK40Q8N2I9 435 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 AADATQ8N5Z0 425 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 FAM204AQ9H8W3 233 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 DDIT4Q9NX09 232 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 ANKRD11Q6UB99 2663 aaPredicted RBP19.04■□□□□ 0.64
CLN6-220ENST00000637450 A0A1B0GVM2 712 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 TCAF2A6NFQ2 919 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 DFNA5O60443 496 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 HSF2BPO75031 334 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 ADH1BP00325 375 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 PDGFRAP16234 1089 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 GOT1P17174 413 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 C5AR1P21730 350 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 MZF1P28698 734 aaPredicted RBP19.04■□□□□ 0.64
CLN6-220ENST00000637450 NNMTP40261 264 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 GRK6P43250 576 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 CCR5P51681 352 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 C21orf59P57076 290 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 KCNJ12Q14500 433 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 RABGAP1LQ5R372 815 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 FBXL22Q6P050 247 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 SND1Q7KZF4 910 aaKnown RBP eCLIP19.04■□□□□ 0.647e-7■□□□□ 8.6
CLN6-220ENST00000637450 TMPRSS7Q7RTY8 843 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 CIR1Q86X95 450 aaPredicted RBP19.04■□□□□ 0.64
CLN6-220ENST00000637450 PROSER1Q86XN7 944 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 RNF34Q969K3 372 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 SLC6A18Q96N87 628 aa19.04■□□□□ 0.64
CLN6-220ENST00000637450 ACE2Q9BYF1 805 aaPredicted RBP19.04■□□□□ 0.64
CLN6-220ENST00000637450 SYNJ2BP-COX16A0A087WUM0 186 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 TNFSF14O43557 240 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 GRAP2O75791 330 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 PSMD8P48556 350 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 VASPP50552 380 aaPredicted RBP19.03■□□□□ 0.64
CLN6-220ENST00000637450 OXCT1P55809 520 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 UBE2HP62256 183 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 PTK2Q05397 1052 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 ELAVL3Q14576 367 aaKnown RBP19.03■□□□□ 0.64
CLN6-220ENST00000637450 CXorf57Q6NSI4 855 aaKnown RBP19.03■□□□□ 0.64
CLN6-220ENST00000637450 OLFML1Q6UWY5 402 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 C11orf57Q6ZUT1 292 aaPredicted RBP19.03■□□□□ 0.64
CLN6-220ENST00000637450 FAM183BPQ6ZVS7 135 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 PASD1Q8IV76 773 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 FRS2Q8WU20 508 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 SKA1Q96BD8 255 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 NOX5Q96PH1 765 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 SIX2Q9NPC8 291 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 COX16Q9P0S2 106 aa19.03■□□□□ 0.64
CLN6-220ENST00000637450 A0A1B0GTQ1 180 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 FOXN3O00409 490 aaPredicted RBP19.02■□□□□ 0.64
CLN6-220ENST00000637450 IL1BP01584 269 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 WNT1P04628 370 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 VAV1P15498 845 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 CLCN1P35523 988 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 NUMBP49757 651 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 ADPRHP54922 357 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 AUHQ13825 339 aaKnown RBP19.02■□□□□ 0.64
CLN6-220ENST00000637450 OR6B2Q6IFH4 312 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 MLKLQ8NB16 471 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 C1orf131Q8NDD1 294 aaKnown RBP19.02■□□□□ 0.64
CLN6-220ENST00000637450 OR14C36Q8NHC7 312 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 ALG14Q96F25 216 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 RPRD1AQ96P16 312 aaPredicted RBP19.02■□□□□ 0.64
CLN6-220ENST00000637450 SPAG5Q96R06 1193 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 PPP1R9BQ96SB3 815 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 DNAJC12Q9UKB3 198 aa19.02■□□□□ 0.64
CLN6-220ENST00000637450 AJAP1Q9UKB5 411 aaPredicted RBP19.02■□□□□ 0.64
CLN6-220ENST00000637450 TPX2Q9ULW0 747 aaKnown RBP19.02■□□□□ 0.64
CLN6-220ENST00000637450 A0A1W2PR77 199 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 GOLGA8CPA6NN73 597 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 WNT9AO14904 365 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 ERBB2P04626 1255 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 CD38P28907 300 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 DRD3P35462 400 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 KRT9P35527 623 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 MTIF2P46199 727 aaKnown RBP19.01■□□□□ 0.63
CLN6-220ENST00000637450 SNX16P57768 344 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 IL9RQ01113 521 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 SLC6A3Q01959 620 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 CENPCQ03188 943 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 MTA1Q13330 715 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 PRAMEF14Q5SWL7 426 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 ZNF397Q8NF99 534 aaPredicted RBP19.01■□□□□ 0.63
CLN6-220ENST00000637450 FAM131CQ96AQ9 280 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 ELF4Q99607 663 aaPredicted RBP19.01■□□□□ 0.63
CLN6-220ENST00000637450 FEM1AQ9BSK4 669 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 CCDC86Q9H6F5 360 aaKnown RBP19.01■□□□□ 0.63
CLN6-220ENST00000637450 AASDHPPTQ9NRN7 309 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 OR51B4Q9Y5P0 310 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 HS3ST4Q9Y661 456 aa19.01■□□□□ 0.63
CLN6-220ENST00000637450 CACNA1GO43497 2377 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3DA0A087WVF3 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3IA0A087WXS9 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3EA0A087X179 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3KA0A087X1G2 549 aa19■□□□□ 0.63
CLN6-220ENST00000637450 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19■□□□□ 0.63
CLN6-220ENST00000637450 TBC1D3FA6NER0 549 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms