RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TEX35Q5T0J7 233 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 ADGRF1Q5T601 910 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 BSPRYQ5W0U4 402 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 IRF2BP2Q7Z5L9 587 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 GLRX5Q86SX6 157 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CTAGE6Q86UF2 777 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 VPS36Q86VN1 386 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 KCTD13Q8WZ19 329 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.31
CTSD-208ENST00000636843 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 TFR2Q9UP52 801 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 PLA2G4CQ9UP65 541 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 APOBEC2Q9Y235 224 aaKnown RBP13.08□□□□□ -0.31
CTSD-208ENST00000636843 TSPAN3O60637 253 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 CBFA2T3O75081 653 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 CCDC172P0C7W6 258 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 CD19P15391 556 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 PRLRP16471 622 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 TBXAS1P24557 533 aaPredicted RBP13.08□□□□□ -0.32
CTSD-208ENST00000636843 HLA-FP30511 346 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 STAT1P42224 750 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 MATKP42679 507 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 APBA1Q02410 837 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 FNDC3BQ53EP0 1204 aaKnown RBP13.08□□□□□ -0.32
CTSD-208ENST00000636843 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.32
CTSD-208ENST00000636843 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTSD-208ENST00000636843 C1orf216Q8TAB5 229 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 NOX5Q96PH1 765 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 TMEM245Q9H330 911 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 GAREM1Q9H706 876 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 SFMBT1Q9UHJ3 866 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 EIF2B4Q9UI10 523 aaKnown RBP13.08□□□□□ -0.32
CTSD-208ENST00000636843 PCDHGB2Q9Y5G2 931 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 DUSP10Q9Y6W6 482 aa13.08□□□□□ -0.32
CTSD-208ENST00000636843 AKAP13Q12802 2813 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 YJEFN3A6XGL0 299 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 BTNL10A8MVZ5 291 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 E7ENQ6 273 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 O00370 1275 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 ATP1A1P05023 1023 aaKnown RBP13.07□□□□□ -0.32
CTSD-208ENST00000636843 ATP5BP06576 529 aaKnown RBP13.07□□□□□ -0.32
CTSD-208ENST00000636843 TUBBP07437 444 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 HLA-EP13747 358 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 MPP7Q5T2T1 576 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 CHST9Q7L1S5 443 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 UNC45BQ8IWX7 931 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 AHI1Q8N157 1196 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 UBR7Q8N806 425 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 ZNF557Q8N988 423 aaPredicted RBP13.07□□□□□ -0.32
CTSD-208ENST00000636843 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 EDEM1Q92611 657 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTSD-208ENST00000636843 INTS2Q9H0H0 1204 aaKnown RBP13.07□□□□□ -0.32
CTSD-208ENST00000636843 TM7SF3Q9NS93 570 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 ABCB8Q9NUT2 735 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 GGA2Q9UJY4 613 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 PCOLCE2Q9UKZ9 415 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 CKAP5Q14008 2032 aa13.07□□□□□ -0.32
CTSD-208ENST00000636843 ASPMQ8IZT6 3477 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 A0A087X0T9 212 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 CAPNS1P04632 268 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 PAEPP09466 180 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
CTSD-208ENST00000636843 FAM228BP0C875 321 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
CTSD-208ENST00000636843 SOX5P35711 763 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 DAOAP59103 153 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 BNC1Q01954 994 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 PTK2Q05397 1052 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 HLA-BQ31612 363 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 PKDCCQ504Y2 493 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 LCLAT1Q6UWP7 414 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 DBX2Q6ZNG2 339 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 ADIPOR2Q86V24 386 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 FAM124AQ86V42 546 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 CACUL1Q86Y37 369 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 CYB5D2Q8WUJ1 264 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 IRGQQ8WZA9 623 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 OSGEPQ9NPF4 335 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 KIAA1522Q9P206 1035 aaPredicted RBP13.06□□□□□ -0.32
CTSD-208ENST00000636843 APEX2Q9UBZ4 518 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 SUN2Q9UH99 717 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
CTSD-208ENST00000636843 ENC1O14682 589 aa13.05□□□□□ -0.32
CTSD-208ENST00000636843 IRAK2O43187 625 aa13.05□□□□□ -0.32
CTSD-208ENST00000636843 MOCS3O95396 460 aa13.05□□□□□ -0.32
CTSD-208ENST00000636843 LCP1P13796 627 aa13.05□□□□□ -0.32
CTSD-208ENST00000636843 TCP1P17987 556 aaKnown RBP13.05□□□□□ -0.32
CTSD-208ENST00000636843 SLC11A2P49281 568 aa13.05□□□□□ -0.32
CTSD-208ENST00000636843 AFF3P51826 1226 aaKnown RBP13.05□□□□□ -0.32
CTSD-208ENST00000636843 SUZ12Q15022 739 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms